Daily Papers

Intrusion detection system (IDS) is an important part of enterprise security system architecture. In particular, anomaly-based IDS has been widely applied to detect abnormal process behaviors that deviate from the majority. However, such abnormal behavior usually consists of a series of low-level heterogeneous events. The gap between the low-level events and the high-level abnormal behaviors makes it hard to infer which single events are related to the real abnormal activities, especially considering that there are massive "noisy" low-level events happening in between. Hence, the existing work that focus on detecting single entities/events can hardly achieve high detection accuracy. Different from previous work, we design and implement GID, an efficient graph-based intrusion detection technique that can identify abnormal event sequences from a massive heterogeneous process traces with high accuracy. GID first builds a compact graph structure to capture the interactions between different system entities. The suspiciousness or anomaly score of process paths is then measured by leveraging random walk technique to the constructed acyclic directed graph. To eliminate the score bias from the path length, the Box-Cox power transformation based approach is introduced to normalize the anomaly scores so that the scores of paths of different lengths have the same distribution. The efficiency of suspicious path discovery is further improved by the proposed optimization scheme. We fully implement our GID algorithm and deploy it into a real enterprise security system, and it greatly helps detect the advanced threats, and optimize the incident response. Executing GID on system monitoring datasets showing that GID is efficient (about 2 million records per minute) and accurate (higher than 80% in terms of detection rate).

This paper investigates Graph Neural Networks (GNNs) application for self-supervised network intrusion and anomaly detection. GNNs are a deep learning approach for graph-based data that incorporate graph structures into learning to generalise graph representations and output embeddings. As network flows are naturally graph-based, GNNs are a suitable fit for analysing and learning network behaviour. The majority of current implementations of GNN-based Network Intrusion Detection Systems (NIDSs) rely heavily on labelled network traffic which can not only restrict the amount and structure of input traffic, but also the NIDSs potential to adapt to unseen attacks. To overcome these restrictions, we present Anomal-E, a GNN approach to intrusion and anomaly detection that leverages edge features and graph topological structure in a self-supervised process. This approach is, to the best our knowledge, the first successful and practical approach to network intrusion detection that utilises network flows in a self-supervised, edge leveraging GNN. Experimental results on two modern benchmark NIDS datasets not only clearly display the improvement of using Anomal-E embeddings rather than raw features, but also the potential Anomal-E has for detection on wild network traffic.

Provenance graphs are structured audit logs that describe the history of a system's execution. Recent studies have explored a variety of techniques to analyze provenance graphs for automated host intrusion detection, focusing particularly on advanced persistent threats. Sifting through their design documents, we identify four common dimensions that drive the development of provenance-based intrusion detection systems (PIDSes): scope (can PIDSes detect modern attacks that infiltrate across application boundaries?), attack agnosticity (can PIDSes detect novel attacks without a priori knowledge of attack characteristics?), timeliness (can PIDSes efficiently monitor host systems as they run?), and attack reconstruction (can PIDSes distill attack activity from large provenance graphs so that sysadmins can easily understand and quickly respond to system intrusion?). We present KAIROS, the first PIDS that simultaneously satisfies the desiderata in all four dimensions, whereas existing approaches sacrifice at least one and struggle to achieve comparable detection performance. Kairos leverages a novel graph neural network-based encoder-decoder architecture that learns the temporal evolution of a provenance graph's structural changes to quantify the degree of anomalousness for each system event. Then, based on this fine-grained information, Kairos reconstructs attack footprints, generating compact summary graphs that accurately describe malicious activity over a stream of system audit logs. Using state-of-the-art benchmark datasets, we demonstrate that Kairos outperforms previous approaches.

Representing networks as a graph and training a link prediction model using benign connections is an effective method of anomaly-based intrusion detection. Existing works using this technique have shown great success using temporal graph neural networks and skip-gram-based approaches on random walks. However, random walk-based approaches are unable to incorporate rich edge data, while the GNN-based approaches require large amounts of memory to train. In this work, we propose extending the original insight from random walk-based skip-grams--that random walks through a graph are analogous to sentences in a corpus--to the more modern transformer-based foundation models. Using language models that take advantage of GPU optimizations, we can quickly train a graph foundation model to predict missing tokens in random walks through a network of computers. The graph foundation model is then finetuned for link prediction and used as a network anomaly detector. This new approach allows us to combine the efficiency of random walk-based methods and the rich semantic representation of deep learning methods. This system, which we call CyberGFM, achieved state-of-the-art results on three widely used network anomaly detection datasets, delivering a up to 2times improvement in average precision. We found that CyberGFM outperforms all prior works in unsupervised link prediction for network anomaly detection, using the same number of parameters, and with equal or better efficiency than the previous best approaches.

Detecting intrusions in network traffic is a challenging task, particularly under limited supervision and constantly evolving attack patterns. While recent works have leveraged graph neural networks for network intrusion detection, they often decouple representation learning from anomaly detection, limiting the utility of the embeddings for identifying attacks. We propose GraphIDS, a self-supervised intrusion detection model that unifies these two stages by learning local graph representations of normal communication patterns through a masked autoencoder. An inductive graph neural network embeds each flow with its local topological context to capture typical network behavior, while a Transformer-based encoder-decoder reconstructs these embeddings, implicitly learning global co-occurrence patterns via self-attention without requiring explicit positional information. During inference, flows with unusually high reconstruction errors are flagged as potential intrusions. This end-to-end framework ensures that embeddings are directly optimized for the downstream task, facilitating the recognition of malicious traffic. On diverse NetFlow benchmarks, GraphIDS achieves up to 99.98% PR-AUC and 99.61% macro F1-score, outperforming baselines by 5-25 percentage points.

Host-based threats such as Program Attack, Malware Implantation, and Advanced Persistent Threats (APT), are commonly adopted by modern attackers. Recent studies propose leveraging the rich contextual information in data provenance to detect threats in a host. Data provenance is a directed acyclic graph constructed from system audit data. Nodes in a provenance graph represent system entities (e.g., processes and files) and edges represent system calls in the direction of information flow. However, previous studies, which extract features of the whole provenance graph, are not sensitive to the small number of threat-related entities and thus result in low performance when hunting stealthy threats. We present threaTrace, an anomaly-based detector that detects host-based threats at system entity level without prior knowledge of attack patterns. We tailor GraphSAGE, an inductive graph neural network, to learn every benign entity's role in a provenance graph. threaTrace is a real-time system, which is scalable of monitoring a long-term running host and capable of detecting host-based intrusion in their early phase. We evaluate threaTrace on three public datasets. The results show that threaTrace outperforms three state-of-the-art host intrusion detection systems.

The convergence of Information Technology and Operational Technology has exposed Industrial Control Systems (ICS) to multi-stage cyberattacks that traverse software, network, and physical process layers simultaneously. Although Provenance-based Intrusion Detection Systems (PIDS) are effective in Information Technology (IT) environments, their applicability to Industrial Cyber-Physical Systems (CPS) remains largely unexplored because of the absence of datasets that jointly capture host-level causal behavior, industrial network semantics, and physical process state. To address this gap, we design an open-source, Hardware-in-the-Loop (HIL) CPS testbed that replicates an industrial chemical reactor control architecture across the Purdue model layers. Using this testbed, we propose ProvICS, a multimodal provenance dataset purpose-built for CPS intrusion detection, which synchronously captures four streams: whole-system provenance graphs from the supervisory host and the resource-constrained PLC, decoded Modbus deep-packet inspection records, and physical process telemetry. The collection comprises a 48-hour benign phase and a 22-hour attack phase across four campaigns covering 20 ICS ATT&CK techniques over 32 attack events, ranging from reconnaissance to physical process manipulation. Comparative analysis shows that ProvICS is among the few existing ICS/CPS benchmarks with multi-host kernel-level provenance, real PLC hardware-in-the-loop execution, decoded Modbus traffic, physical process-state measurements, and auxiliary raw PCAP traces in a time-synchronized collection. Baseline detection further confirms that cross-modal fusion can detect all 32 labeled attack events (F1 = 0.913, false-positive rate (FPR) = 1.40%), demonstrating the dataset's ability to expose complementary attack signals across modalities and addressing a gap not covered by prior benchmarks.

Information systems have widely been the target of malware attacks. Traditional signature-based malicious program detection algorithms can only detect known malware and are prone to evasion techniques such as binary obfuscation, while behavior-based approaches highly rely on the malware training samples and incur prohibitively high training cost. To address the limitations of existing techniques, we propose MatchGNet, a heterogeneous Graph Matching Network model to learn the graph representation and similarity metric simultaneously based on the invariant graph modeling of the program's execution behaviors. We conduct a systematic evaluation of our model and show that it is accurate in detecting malicious program behavior and can help detect malware attacks with less false positives. MatchGNet outperforms the state-of-the-art algorithms in malware detection by generating 50% less false positives while keeping zero false negatives.

Cyber-physical-social systems (CPSSs) have emerged in many applications over recent decades, requiring increased attention to security concerns. The rise of sophisticated threats like Advanced Persistent Threats (APTs) makes ensuring security in CPSSs particularly challenging. Provenance graph analysis has proven effective for tracing and detecting anomalies within systems, but the sheer size and complexity of these graphs hinder the efficiency of existing methods, especially those relying on graph neural networks (GNNs). To address these challenges, we present GraphDART, a modular framework designed to distill provenance graphs into compact yet informative representations, enabling scalable and effective anomaly detection. GraphDART can take advantage of diverse graph distillation techniques, including classic and modern graph distillation methods, to condense large provenance graphs while preserving essential structural and contextual information. This approach significantly reduces computational overhead, allowing GNNs to learn from distilled graphs efficiently and enhance detection performance. Extensive evaluations on benchmark datasets demonstrate the robustness of GraphDART in detecting malicious activities across cyber-physical-social systems. By optimizing computational efficiency, GraphDART provides a scalable and practical solution to safeguard interconnected environments against APTs.

Cyber threat intelligence (CTI) is being used to search for indicators of attacks that might have compromised an enterprise network for a long time without being discovered. To have a more effective analysis, CTI open standards have incorporated descriptive relationships showing how the indicators or observables are related to each other. However, these relationships are either completely overlooked in information gathering or not used for threat hunting. In this paper, we propose a system, called POIROT, which uses these correlations to uncover the steps of a successful attack campaign. We use kernel audits as a reliable source that covers all causal relations and information flows among system entities and model threat hunting as an inexact graph pattern matching problem. Our technical approach is based on a novel similarity metric which assesses an alignment between a query graph constructed out of CTI correlations and a provenance graph constructed out of kernel audit log records. We evaluate POIROT on publicly released real-world incident reports as well as reports of an adversarial engagement designed by DARPA, including ten distinct attack campaigns against different OS platforms such as Linux, FreeBSD, and Windows. Our evaluation results show that POIROT is capable of searching inside graphs containing millions of nodes and pinpoint the attacks in a few minutes, and the results serve to illustrate that CTI correlations could be used as robust and reliable artifacts for threat hunting.

Advanced Persistent Threats (APTs) are stealthy cyberattacks that often evade detection in system-level audit logs. Provenance graphs model these logs as connected entities and events, revealing relationships that are missed by linear log representations. Existing systems apply anomaly detection to these graphs but often suffer from high false positive rates and coarse-grained alerts. Their reliance on node attributes like file paths or IPs leads to spurious correlations, reducing detection robustness and reliability. To fully understand an attack's progression and impact, security analysts need systems that can generate accurate, human-like narratives of the entire attack. To address these challenges, we introduce OCR-APT, a system for APT detection and reconstruction of human-like attack stories. OCR-APT uses Graph Neural Networks (GNNs) for subgraph anomaly detection, learning behavior patterns around nodes rather than fragile attributes such as file paths or IPs. This approach leads to a more robust anomaly detection. It then iterates over detected subgraphs using Large Language Models (LLMs) to reconstruct multi-stage attack stories. Each stage is validated before proceeding, reducing hallucinations and ensuring an interpretable final report. Our evaluations on the DARPA TC3, OpTC, and NODLINK datasets show that OCR-APT outperforms state-of-the-art systems in both detection accuracy and alert interpretability. Moreover, OCR-APT reconstructs human-like reports that comprehensively capture the attack story.

Graph anomaly detection has gained significant attention across various domains, particularly in critical applications like fraud detection in e-commerce platforms and insider threat detection in cybersecurity. Usually, these data are composed of multiple types (e.g., user information and transaction records for financial data), thus exhibiting view heterogeneity. However, in the era of big data, the heterogeneity of views and the lack of label information pose substantial challenges to traditional approaches. Existing unsupervised graph anomaly detection methods often struggle with high-dimensionality issues, rely on strong assumptions about graph structures or fail to handle complex multi-view graphs. To address these challenges, we propose a cluster aware multi-view graph anomaly detection method, called CARE. Our approach captures both local and global node affinities by augmenting the graph's adjacency matrix with the pseudo-label (i.e., soft membership assignments) without any strong assumption about the graph. To mitigate potential biases from the pseudo-label, we introduce a similarity-guided loss. Theoretically, we show that the proposed similarity-guided loss is a variant of contrastive learning loss, and we present how this loss alleviates the bias introduced by pseudo-label with the connection to graph spectral clustering. Experimental results on several datasets demonstrate the effectiveness and efficiency of our proposed framework. Specifically, CARE outperforms the second-best competitors by more than 39% on the Amazon dataset with respect to AUPRC and 18.7% on the YelpChi dataset with respect to AUROC. The code of our method is available at the GitHub link: https://github.com/zhenglecheng/CARE-demo.

The advancement of graph-based malware analysis is critically limited by the absence of large-scale datasets that capture the inherent hierarchical structure of software. Existing methods often oversimplify programs into single level graphs, failing to model the crucial semantic relationship between high-level functional interactions and low-level instruction logic. To bridge this gap, we introduce \dataset, the largest public hierarchical graph dataset for malware analysis, comprising over 200M Control Flow Graphs (CFGs) nested within 595K Function Call Graphs (FCGs). This two-level representation preserves structural semantics essential for building robust detectors resilient to code obfuscation and malware evolution. We demonstrate HiGraph's utility through a large-scale analysis that reveals distinct structural properties of benign and malicious software, establishing it as a foundational benchmark for the community. The dataset and tools are publicly available at https://higraph.org.

Graph mining workloads aim to extract structural properties of a graph by exploring its subgraph structures. General purpose graph mining systems provide a generic runtime to explore subgraph structures of interest with the help of user-defined functions that guide the overall exploration process. However, the state-of-the-art graph mining systems remain largely oblivious to the shape (or pattern) of the subgraphs that they mine. This causes them to: (a) explore unnecessary subgraphs; (b) perform expensive computations on the explored subgraphs; and, (c) hold intermediate partial subgraphs in memory; all of which affect their overall performance. Furthermore, their programming models are often tied to their underlying exploration strategies, which makes it difficult for domain users to express complex mining tasks. In this paper, we develop Peregrine, a pattern-aware graph mining system that directly explores the subgraphs of interest while avoiding exploration of unnecessary subgraphs, and simultaneously bypassing expensive computations throughout the mining process. We design a pattern-based programming model that treats "graph patterns" as first class constructs and enables Peregrine to extract the semantics of patterns, which it uses to guide its exploration. Our evaluation shows that Peregrine outperforms state-of-the-art distributed and single machine graph mining systems, and scales to complex mining tasks on larger graphs, while retaining simplicity and expressivity with its "pattern-first" programming approach.

Graph Neural Networks (GNNs) have been widely applied to different tasks such as bioinformatics, drug design, and social networks. However, recent studies have shown that GNNs are vulnerable to adversarial attacks which aim to mislead the node or subgraph classification prediction by adding subtle perturbations. Detecting these attacks is challenging due to the small magnitude of perturbation and the discrete nature of graph data. In this paper, we propose a general adversarial edge detection pipeline EDoG without requiring knowledge of the attack strategies based on graph generation. Specifically, we propose a novel graph generation approach combined with link prediction to detect suspicious adversarial edges. To effectively train the graph generative model, we sample several sub-graphs from the given graph data. We show that since the number of adversarial edges is usually low in practice, with low probability the sampled sub-graphs will contain adversarial edges based on the union bound. In addition, considering the strong attacks which perturb a large number of edges, we propose a set of novel features to perform outlier detection as the preprocessing for our detection. Extensive experimental results on three real-world graph datasets including a private transaction rule dataset from a major company and two types of synthetic graphs with controlled properties show that EDoG can achieve above 0.8 AUC against four state-of-the-art unseen attack strategies without requiring any knowledge about the attack type; and around 0.85 with knowledge of the attack type. EDoG significantly outperforms traditional malicious edge detection baselines. We also show that an adaptive attack with full knowledge of our detection pipeline is difficult to bypass it.

The effectiveness of network intrusion detection systems, predominantly based on machine learning, are highly influenced by the dataset they are trained on. Ensuring an accurate reflection of the multifaceted nature of benign and malicious traffic in these datasets is essential for creating models capable of recognizing and responding to a wide array of intrusion patterns. However, existing datasets often fall short, lacking the necessary diversity and alignment with the contemporary network environment, thereby limiting the effectiveness of intrusion detection. This paper introduces TII-SSRC-23, a novel and comprehensive dataset designed to overcome these challenges. Comprising a diverse range of traffic types and subtypes, our dataset is a robust and versatile tool for the research community. Additionally, we conduct a feature importance analysis, providing vital insights into critical features for intrusion detection tasks. Through extensive experimentation, we also establish firm baselines for supervised and unsupervised intrusion detection methodologies using our dataset, further contributing to the advancement and adaptability of intrusion detection models in the rapidly changing landscape of network security. Our dataset is available at https://kaggle.com/datasets/daniaherzalla/tii-ssrc-23.

Prime Video regularly conducts load tests to simulate the viewer traffic spikes seen during live events such as Thursday Night Football as well as video-on-demand (VOD) events such as Rings of Power. While these stress tests validate system capacity, they can sometimes miss service behaviors unique to real event traffic. We present a graph-based anomaly detection system that identifies under-represented services using unsupervised node-level graph embeddings. Built on a GCN-GAE, our approach learns structural representations from directed, weighted service graphs at minute-level resolution and flags anomalies based on cosine similarity between load test and event embeddings. The system identifies incident-related services that are documented and demonstrates early detection capability. We also introduce a preliminary synthetic anomaly injection framework for controlled evaluation that show promising precision (96%) and low false positive rate (0.08%), though recall (58%) remains limited under conservative propagation assumptions. This framework demonstrates practical utility within Prime Video while also surfacing methodological lessons and directions, providing a foundation for broader application across microservice ecosystems.

Detecting which nodes in graphs are outliers is a relatively new machine learning task with numerous applications. Despite the proliferation of algorithms developed in recent years for this task, there has been no standard comprehensive setting for performance evaluation. Consequently, it has been difficult to understand which methods work well and when under a broad range of settings. To bridge this gap, we present--to the best of our knowledge--the first comprehensive benchmark for unsupervised outlier node detection on static attributed graphs called BOND, with the following highlights. (1) We benchmark the outlier detection performance of 14 methods ranging from classical matrix factorization to the latest graph neural networks. (2) Using nine real datasets, our benchmark assesses how the different detection methods respond to two major types of synthetic outliers and separately to "organic" (real non-synthetic) outliers. (3) Using an existing random graph generation technique, we produce a family of synthetically generated datasets of different graph sizes that enable us to compare the running time and memory usage of the different outlier detection algorithms. Based on our experimental results, we discuss the pros and cons of existing graph outlier detection algorithms, and we highlight opportunities for future research. Importantly, our code is freely available and meant to be easily extendable: https://github.com/pygod-team/pygod/tree/main/benchmark

Graph-structured data, which captures non-Euclidean relationships and interactions between entities, is growing in scale and complexity. As a result, training state-of-the-art graph machine learning (GML) models have become increasingly resource-intensive, turning these models and data into invaluable Intellectual Property (IP). To address the resource-intensive nature of model training, graph-based Machine-Learning-as-a-Service (GMLaaS) has emerged as an efficient solution by leveraging third-party cloud services for model development and management. However, deploying such models in GMLaaS also exposes them to potential threats from attackers. Specifically, while the APIs within a GMLaaS system provide interfaces for users to query the model and receive outputs, they also allow attackers to exploit and steal model functionalities or sensitive training data, posing severe threats to the safety of these GML models and the underlying graph data. To address these challenges, this survey systematically introduces the first taxonomy of threats and defenses at the level of both GML model and graph-structured data. Such a tailored taxonomy facilitates an in-depth understanding of GML IP protection. Furthermore, we present a systematic evaluation framework to assess the effectiveness of IP protection methods, introduce a curated set of benchmark datasets across various domains, and discuss their application scopes and future challenges. Finally, we establish an open-sourced versatile library named PyGIP, which evaluates various attack and defense techniques in GMLaaS scenarios and facilitates the implementation of existing benchmark methods. The library resource can be accessed at: https://labrai.github.io/PyGIP. We believe this survey will play a fundamental role in intellectual property protection for GML and provide practical recipes for the GML community.

This paper presents the FlowTransformer framework, a novel approach for implementing transformer-based Network Intrusion Detection Systems (NIDSs). FlowTransformer leverages the strengths of transformer models in identifying the long-term behaviour and characteristics of networks, which are often overlooked by most existing NIDSs. By capturing these complex patterns in network traffic, FlowTransformer offers a flexible and efficient tool for researchers and practitioners in the cybersecurity community who are seeking to implement NIDSs using transformer-based models. FlowTransformer allows the direct substitution of various transformer components, including the input encoding, transformer, classification head, and the evaluation of these across any flow-based network dataset. To demonstrate the effectiveness and efficiency of the FlowTransformer framework, we utilise it to provide an extensive evaluation of various common transformer architectures, such as GPT 2.0 and BERT, on three commonly used public NIDS benchmark datasets. We provide results for accuracy, model size and speed. A key finding of our evaluation is that the choice of classification head has the most significant impact on the model performance. Surprisingly, Global Average Pooling, which is commonly used in text classification, performs very poorly in the context of NIDS. In addition, we show that model size can be reduced by over 50\%, and inference and training times improved, with no loss of accuracy, by making specific choices of input encoding and classification head instead of other commonly used alternatives.

The Controller Area Network (CAN) protocol is widely adopted for in-vehicle communication but lacks inherent security mechanisms, making it vulnerable to cyberattacks. This paper introduces KD-GAT, an intrusion detection framework that combines Graph Attention Networks (GATs) with knowledge distillation (KD) to enhance detection accuracy while reducing computational complexity. In our approach, CAN traffic is represented as graphs using a sliding window to capture temporal and relational patterns. A multi-layer GAT with jumping knowledge aggregation acting as the teacher model, while a compact student GAT--only 6.32% the size of the teacher--is trained via a two-phase process involving supervised pretraining and knowledge distillation with both soft and hard label supervision. Experiments on three benchmark datasets--Car-Hacking, Car-Survival, and can-train-and-test demonstrate that both teacher and student models achieve strong results, with the student model attaining 99.97% and 99.31% accuracy on Car-Hacking and Car-Survival, respectively. However, significant class imbalance in can-train-and-test has led to reduced performance for both models on this dataset. Addressing this imbalance remains an important direction for future work.

Graph Neural Networks (GNNs) have achieved promising results in various tasks such as node classification and graph classification. Recent studies find that GNNs are vulnerable to adversarial attacks. However, effective backdoor attacks on graphs are still an open problem. In particular, backdoor attack poisons the graph by attaching triggers and the target class label to a set of nodes in the training graph. The backdoored GNNs trained on the poisoned graph will then be misled to predict test nodes to target class once attached with triggers. Though there are some initial efforts in graph backdoor attacks, our empirical analysis shows that they may require a large attack budget for effective backdoor attacks and the injected triggers can be easily detected and pruned. Therefore, in this paper, we study a novel problem of unnoticeable graph backdoor attacks with limited attack budget. To fully utilize the attack budget, we propose to deliberately select the nodes to inject triggers and target class labels in the poisoning phase. An adaptive trigger generator is deployed to obtain effective triggers that are difficult to be noticed. Extensive experiments on real-world datasets against various defense strategies demonstrate the effectiveness of our proposed method in conducting effective unnoticeable backdoor attacks.

Recent provenance-based intrusion detection systems (PIDSs) have demonstrated strong potential for detecting advanced persistent threats (APTs) by applying machine learning to system provenance graphs. However, evaluating and comparing PIDSs remains difficult: prior work uses inconsistent preprocessing pipelines, non-standard dataset splits, and incompatible ground-truth labeling and metrics. These discrepancies undermine reproducibility, impede fair comparison, and impose substantial re-implementation overhead on researchers. We present PIDSMaker, an open-source framework for developing and evaluating PIDSs under consistent protocols. PIDSMaker consolidates eight state-of-the-art systems into a modular, extensible architecture with standardized preprocessing and ground-truth labels, enabling consistent experiments and apples-to-apples comparisons. A YAML-based configuration interface supports rapid prototyping by composing components across systems without code changes. PIDSMaker also includes utilities for ablation studies, hyperparameter tuning, multi-run instability measurement, and visualization, addressing methodological gaps identified in prior work. We demonstrate PIDSMaker through concrete use cases and release it with preprocessed datasets and labels to support shared evaluation for the PIDS community.

Network intrusion detection remains a critical challenge in cybersecurity. While supervised machine learning models achieve state-of-the-art performance, their reliance on large labelled datasets makes them impractical for many real-world applications. Anomaly detection methods, which train exclusively on benign traffic to identify malicious activity, suffer from high false positive rates, limiting their usability. Recently, self-supervised learning techniques have demonstrated improved performance with lower false positive rates by learning discriminative latent representations of benign traffic. In particular, contrastive self-supervised models achieve this by minimizing the distance between similar (positive) views of benign traffic while maximizing it between dissimilar (negative) views. Existing approaches generate positive views through data augmentation and treat other samples as negative. In contrast, this work introduces Contrastive Learning using Augmented Negative pairs (CLAN), a novel paradigm for network intrusion detection where augmented samples are treated as negative views - representing potentially malicious distributions - while other benign samples serve as positive views. This approach enhances both classification accuracy and inference efficiency after pretraining on benign traffic. Experimental evaluation on the Lycos2017 dataset demonstrates that the proposed method surpasses existing self-supervised and anomaly detection techniques in a binary classification task. Furthermore, when fine-tuned on a limited labelled dataset, the proposed approach achieves superior multi-class classification performance compared to existing self-supervised models.

Control Flow Graphs (CFGs) are critical for analyzing program execution and characterizing malware behavior. With the growing adoption of Graph Neural Networks (GNNs), CFG-based representations have proven highly effective for malware detection. This study proposes a novel framework that dynamically constructs CFGs and embeds node features using a hybrid approach combining rule-based encoding and autoencoder-based embedding. A GNN-based classifier is then constructed to detect malicious behavior from the resulting graph representations. To improve model interpretability, we apply state-of-the-art explainability techniques, including GNNExplainer, PGExplainer, and CaptumExplainer, the latter is utilized three attribution methods: Integrated Gradients, Guided Backpropagation, and Saliency. In addition, we introduce a novel aggregation method, called RankFusion, that integrates the outputs of the top-performing explainers to enhance the explanation quality. We also evaluate explanations using two subgraph extraction strategies, including the proposed Greedy Edge-wise Composition (GEC) method for improved structural coherence. A comprehensive evaluation using accuracy, fidelity, and consistency metrics demonstrates the effectiveness of the proposed framework in terms of accurate identification of malware samples and generating reliable and interpretable explanations.

Vulnerability identification is crucial to protect the software systems from attacks for cyber security. It is especially important to localize the vulnerable functions among the source code to facilitate the fix. However, it is a challenging and tedious process, and also requires specialized security expertise. Inspired by the work on manually-defined patterns of vulnerabilities from various code representation graphs and the recent advance on graph neural networks, we propose Devign, a general graph neural network based model for graph-level classification through learning on a rich set of code semantic representations. It includes a novel Conv module to efficiently extract useful features in the learned rich node representations for graph-level classification. The model is trained over manually labeled datasets built on 4 diversified large-scale open-source C projects that incorporate high complexity and variety of real source code instead of synthesis code used in previous works. The results of the extensive evaluation on the datasets demonstrate that Devign outperforms the state of the arts significantly with an average of 10.51% higher accuracy and 8.68\% F1 score, increases averagely 4.66% accuracy and 6.37% F1 by the Conv module.

Dependency graph, as a heterogeneous graph representing the intrinsic relationships between different pairs of system entities, is essential to many data analysis applications, such as root cause diagnosis, intrusion detection, etc. Given a well-trained dependency graph from a source domain and an immature dependency graph from a target domain, how can we extract the entity and dependency knowledge from the source to enhance the target? One way is to directly apply a mature dependency graph learned from a source domain to the target domain. But due to the domain variety problem, directly using the source dependency graph often can not achieve good performance. Traditional transfer learning methods mainly focus on numerical data and are not applicable. In this paper, we propose ACRET, a knowledge transfer based model for accelerating dependency graph learning from heterogeneous categorical event streams. In particular, we first propose an entity estimation model to filter out irrelevant entities from the source domain based on entity embedding and manifold learning. Only the entities with statistically high correlations are transferred to the target domain. On the surviving entities, we propose a dependency construction model for constructing the unbiased dependency relationships by solving a two-constraint optimization problem. The experimental results on synthetic and real-world datasets demonstrate the effectiveness and efficiency of ACRET. We also apply ACRET to a real enterprise security system for intrusion detection. Our method is able to achieve superior detection performance at least 20 days lead lag time in advance with more than 70% accuracy.

Nowadays, graph-structured data are increasingly used to model complex systems. Meanwhile, detecting anomalies from graph has become a vital research problem of pressing societal concerns. Anomaly detection is an unsupervised learning task of identifying rare data that differ from the majority. As one of the dominant anomaly detection algorithms, One Class Support Vector Machine has been widely used to detect outliers. However, those traditional anomaly detection methods lost their effectiveness in graph data. Since traditional anomaly detection methods are stable, robust and easy to use, it is vitally important to generalize them to graph data. In this work, we propose One Class Graph Neural Network (OCGNN), a one-class classification framework for graph anomaly detection. OCGNN is designed to combine the powerful representation ability of Graph Neural Networks along with the classical one-class objective. Compared with other baselines, OCGNN achieves significant improvements in extensive experiments.

This tutorial serves as a comprehensive guide for understanding graph databases, focusing on the fundamentals of graph theory while showcasing practical applications across various fields. It starts by introducing foundational concepts and delves into the structure of graphs through nodes and edges, covering different types such as undirected, directed, weighted, and unweighted graphs. Key graph properties, terminologies, and essential algorithms for network analysis are outlined, including Dijkstras shortest path algorithm and methods for calculating node centrality and graph connectivity. The tutorial highlights the advantages of graph databases over traditional relational databases, particularly in efficiently managing complex, interconnected data. It examines leading graph database systems such as Neo4j, Amazon Neptune, and ArangoDB, emphasizing their unique features for handling large datasets. Practical instructions on graph operations using NetworkX and Neo4j are provided, covering node and edge creation, attribute assignment, and advanced queries with Cypher. Additionally, the tutorial explores common graph visualization techniques using tools like Plotly and Neo4j Bloom, which enhance the interpretation and usability of graph data. It also delves into community detection algorithms, including the Louvain method, which facilitates clustering in large networks. Finally, the paper concludes with recommendations for researchers interested in exploring the vast potential of graph technologies.

Graph-based malware classifiers can achieve over 94% accuracy on standard Android datasets, yet we find they suffer accuracy drops of up to 45% when evaluated on previously unseen malware variants from the same family - a scenario where strong generalization would typically be expected. This highlights a key limitation in existing approaches: both the model architectures and their structure-only representations often fail to capture deeper semantic patterns. In this work, we propose a robust semantic enrichment framework that enhances function call graphs with contextual features, including function-level metadata and, when available, code embeddings derived from large language models. The framework is designed to operate under real-world constraints where feature availability is inconsistent, and supports flexible integration of semantic signals. To evaluate generalization under realistic domain and temporal shifts, we introduce two new benchmarks: MalNet-Tiny-Common and MalNet-Tiny-Distinct, constructed using malware family partitioning to simulate cross-family generalization and evolving threat behavior. Experiments across multiple graph neural network backbones show that our method improves classification performance by up to 8% under distribution shift and consistently enhances robustness when integrated with adaptation-based methods. These results offer a practical path toward building resilient malware detection systems in evolving threat environments.

Graph-level anomaly detection aims to identify anomalous graphs from a collection of graphs in an unsupervised manner. A common assumption of anomaly detection is that a reasonable decision boundary has a hypersphere shape, but may appear some non-conforming phenomena in high dimensions. Towards this end, we firstly propose a novel deep graph-level anomaly detection model, which learns the graph representation with maximum mutual information between substructure and global structure features while exploring a hypersphere anomaly decision boundary. The idea is to ensure the training data distribution consistent with the decision hypersphere via an orthogonal projection layer. Moreover, we further perform the bi-hypersphere compression to emphasize the discrimination of anomalous graphs from normal graphs. Note that our method is not confined to graph data and is applicable to anomaly detection of other data such as images. The numerical and visualization results on benchmark datasets demonstrate the effectiveness and superiority of our methods in comparison to many baselines and state-of-the-arts.

The widespread application of graph data in various high-risk scenarios has increased attention to graph anomaly detection (GAD). Faced with real-world graphs that often carry node descriptions in the form of raw text sequences, termed text-attributed graphs (TAGs), existing graph anomaly detection pipelines typically involve shallow embedding techniques to encode such textual information into features, and then rely on complex self-supervised tasks within the graph domain to detect anomalies. However, this text encoding process is separated from the anomaly detection training objective in the graph domain, making it difficult to ensure that the extracted textual features focus on GAD-relevant information, seriously constraining the detection capability. How to seamlessly integrate raw text and graph topology to unleash the vast potential of cross-modal data in TAGs for anomaly detection poses a challenging issue. This paper presents a novel end-to-end paradigm for text-attributed graph anomaly detection, named CMUCL. We simultaneously model data from both text and graph structures, and jointly train text and graph encoders by leveraging cross-modal and uni-modal multi-scale consistency to uncover potential anomaly-related information. Accordingly, we design an anomaly score estimator based on inconsistency mining to derive node-specific anomaly scores. Considering the lack of benchmark datasets tailored for anomaly detection on TAGs, we release 8 datasets to facilitate future research. Extensive evaluations show that CMUCL significantly advances in text-attributed graph anomaly detection, delivering an 11.13% increase in average accuracy (AP) over the suboptimal.

The superiority of graph contrastive learning (GCL) has prompted its application to anomaly detection tasks for more powerful risk warning systems. Unfortunately, existing GCL-based models tend to excessively prioritize overall detection performance while neglecting robustness to structural imbalance, which can be problematic for many real-world networks following power-law degree distributions. Particularly, GCL-based methods may fail to capture tail anomalies (abnormal nodes with low degrees). This raises concerns about the security and robustness of current anomaly detection algorithms and therefore hinders their applicability in a variety of realistic high-risk scenarios. To the best of our knowledge, research on the robustness of graph anomaly detection to structural imbalance has received little scrutiny. To address the above issues, this paper presents a novel GCL-based framework named AD-GCL. It devises the neighbor pruning strategy to filter noisy edges for head nodes and facilitate the detection of genuine tail nodes by aligning from head nodes to forged tail nodes. Moreover, AD-GCL actively explores potential neighbors to enlarge the receptive field of tail nodes through anomaly-guided neighbor completion. We further introduce intra- and inter-view consistency loss of the original and augmentation graph for enhanced representation. The performance evaluation of the whole, head, and tail nodes on multiple datasets validates the comprehensive superiority of the proposed AD-GCL in detecting both head anomalies and tail anomalies.

As the Internet rapidly expands, the increasing complexity and diversity of network activities pose significant challenges to effective network governance and security regulation. Network traffic, which serves as a crucial data carrier of network activities, has become indispensable in this process. Network traffic detection aims to monitor, analyze, and evaluate the data flows transmitted across the network to ensure network security and optimize performance. However, existing network traffic detection methods generally suffer from several limitations: 1) a narrow focus on characterizing traffic features from a single perspective; 2) insufficient exploration of discriminative features for different traffic; 3) poor generalization to different traffic scenarios. To address these issues, we propose a multi-view correlation-aware framework named FlowID for network traffic detection. FlowID captures multi-view traffic features via temporal and interaction awareness, while a hypergraph encoder further explores higher-order relationships between flows. To overcome the challenges of data imbalance and label scarcity, we design a dual-contrastive proxy task, enhancing the framework's ability to differentiate between various traffic flows through traffic-to-traffic and group-to-group contrast. Extensive experiments on five real-world datasets demonstrate that FlowID significantly outperforms existing methods in accuracy, robustness, and generalization across diverse network scenarios, particularly in detecting malicious traffic.

The study of network robustness is a critical tool in the characterization and sense making of complex interconnected systems such as infrastructure, communication and social networks. While significant research has been conducted in all of these areas, gaps in the surveying literature still exist. Answers to key questions are currently scattered across multiple scientific fields and numerous papers. In this survey, we distill key findings across numerous domains and provide researchers crucial access to important information by--(1) summarizing and comparing recent and classical graph robustness measures; (2) exploring which robustness measures are most applicable to different categories of networks (e.g., social, infrastructure; (3) reviewing common network attack strategies, and summarizing which attacks are most effective across different network topologies; and (4) extensive discussion on selecting defense techniques to mitigate attacks across a variety of networks. This survey guides researchers and practitioners in navigating the expansive field of network robustness, while summarizing answers to key questions. We conclude by highlighting current research directions and open problems.

In this paper, we propose XG-BoT, an explainable deep graph neural network model for botnet node detection. The proposed model comprises a botnet detector and an explainer for automatic forensics. The XG-BoT detector can effectively detect malicious botnet nodes in large-scale networks. Specifically, it utilizes a grouped reversible residual connection with a graph isomorphism network to learn expressive node representations from botnet communication graphs. The explainer, based on the GNNExplainer and saliency map in XG-BoT, can perform automatic network forensics by highlighting suspicious network flows and related botnet nodes. We evaluated XG-BoT using real-world, large-scale botnet network graph datasets. Overall, XG-BoT outperforms state-of-the-art approaches in terms of key evaluation metrics. Additionally, we demonstrate that the XG-BoT explainers can generate useful explanations for automatic network forensics.

Signature-based Intrusion Detection Systems (IDS) detect malicious activities by matching network or host activity against predefined rules. These rules are derived from extensive Cyber Threat Intelligence (CTI), which includes attack signatures and behavioral patterns obtained through automated tools and manual threat analysis, such as sandboxing. The CTI is then transformed into actionable rules for the IDS engine, enabling real-time detection and prevention. However, the constant evolution of cyber threats necessitates frequent rule updates, which delay deployment time and weaken overall security readiness. Recent advancements in agentic systems powered by Large Language Models (LLMs) offer the potential for autonomous IDS rule generation with internal evaluation. We introduce FALCON, an autonomous agentic framework that generates deployable IDS rules from CTI data in real-time and evaluates them using built-in multi-phased validators. To demonstrate versatility, we target both network (Snort) and host-based (YARA) mediums and construct a comprehensive dataset of IDS rules with their corresponding CTIs. Our evaluations indicate FALCON excels in automatic rule generation, with an average of 95% accuracy validated by qualitative evaluation with 84% inter-rater agreement among multiple cybersecurity analysts across all metrics. These results underscore the feasibility and effectiveness of LLM-driven data mining for real-time cyber threat mitigation.

Graph neural networks (GNNs) have brought superb performance to various applications utilizing graph structural data, such as social analysis and fraud detection. The graph links, e.g., social relationships and transaction history, are sensitive and valuable information, which raises privacy concerns when using GNNs. To exploit these vulnerabilities, we propose VertexSerum, a novel graph poisoning attack that increases the effectiveness of graph link stealing by amplifying the link connectivity leakage. To infer node adjacency more accurately, we propose an attention mechanism that can be embedded into the link detection network. Our experiments demonstrate that VertexSerum significantly outperforms the SOTA link inference attack, improving the AUC scores by an average of 9.8% across four real-world datasets and three different GNN structures. Furthermore, our experiments reveal the effectiveness of VertexSerum in both black-box and online learning settings, further validating its applicability in real-world scenarios.

We develop graph-based methods for semi-supervised learning based on label propagation on a data similarity graph. When data is abundant or arrive in a stream, the problems of computation and data storage arise for any graph-based method. We propose a fast approximate online algorithm that solves for the harmonic solution on an approximate graph. We show, both empirically and theoretically, that good behavior can be achieved by collapsing nearby points into a set of local representative points that minimize distortion. Moreover, we regularize the harmonic solution to achieve better stability properties. We also present graph-based methods for detecting conditional anomalies and apply them to the identification of unusual clinical actions in hospitals. Our hypothesis is that patient-management actions that are unusual with respect to the past patients may be due to errors and that it is worthwhile to raise an alert if such a condition is encountered. Conditional anomaly detection extends standard unconditional anomaly framework but also faces new problems known as fringe and isolated points. We devise novel nonparametric graph-based methods to tackle these problems. Our methods rely on graph connectivity analysis and soft harmonic solution. Finally, we conduct an extensive human evaluation study of our conditional anomaly methods by 15 experts in critical care.

Enterprises and organizations are faced with potential threats from insider employees that may lead to serious consequences. Previous studies on insider threat detection (ITD) mainly focus on detecting abnormal users or abnormal time periods (e.g., a week or a day). However, a user may have hundreds of thousands of activities in the log, and even within a day there may exist thousands of activities for a user, requiring a high investigation budget to verify abnormal users or activities given the detection results. On the other hand, existing works are mainly post-hoc methods rather than real-time detection, which can not report insider threats in time before they cause loss. In this paper, we conduct the first study towards real-time ITD at activity level, and present a fine-grained and efficient framework LAN. Specifically, LAN simultaneously learns the temporal dependencies within an activity sequence and the relationships between activities across sequences with graph structure learning. Moreover, to mitigate the data imbalance problem in ITD, we propose a novel hybrid prediction loss, which integrates self-supervision signals from normal activities and supervision signals from abnormal activities into a unified loss for anomaly detection. We evaluate the performance of LAN on two widely used datasets, i.e., CERT r4.2 and CERT r5.2. Extensive and comparative experiments demonstrate the superiority of LAN, outperforming 9 state-of-the-art baselines by at least 9.92% and 6.35% in AUC for real-time ITD on CERT r4.2 and r5.2, respectively. Moreover, LAN can be also applied to post-hoc ITD, surpassing 8 competitive baselines by at least 7.70% and 4.03% in AUC on two datasets. Finally, the ablation study, parameter analysis, and compatibility analysis evaluate the impact of each module and hyper-parameter in LAN. The source code can be obtained from https://github.com/Li1Neo/LAN.

Network data packet anomaly detection faces numerous challenges, including exploring new anomaly supervision signals, researching weakly supervised anomaly detection, and improving model interpretability. This paper proposes NIDS-GPT, a GPT-based causal language model for network intrusion detection. Unlike previous work, NIDS-GPT innovatively treats each number in the packet as an independent "word" rather than packet fields, enabling a more fine-grained data representation. We adopt an improved GPT-2 model and design special tokenizers and embedding layers to better capture the structure and semantics of network data. NIDS-GPT has good scalability, supports unsupervised pre-training, and enhances model interpretability through attention weight visualization. Experiments on the CICIDS2017 and car-hacking datasets show that NIDS-GPT achieves 100\% accuracy under extreme imbalance conditions, far surpassing traditional methods; it also achieves over 90\% accuracy in one-shot learning. These results demonstrate NIDS-GPT's excellent performance and potential in handling complex network anomaly detection tasks, especially in data-imbalanced and resource-constrained scenarios. The code is available at \url{https://github.com/woshixiaobai2019/nids-gpt.gi

Machine learning and data mining algorithms play important roles in designing intrusion detection systems. Based on their approaches toward the detection of attacks in a network, intrusion detection systems can be broadly categorized into two types. In the misuse detection systems, an attack in a system is detected whenever the sequence of activities in the network matches with a known attack signature. In the anomaly detection approach, on the other hand, anomalous states in a system are identified based on a significant difference in the state transitions of the system from its normal states. This chapter presents a comprehensive discussion on some of the existing schemes of intrusion detection based on misuse detection, anomaly detection and hybrid detection approaches. Some future directions of research in the design of algorithms for intrusion detection are also identified.

Anomaly detection on attributed graphs plays an essential role in applications such as fraud detection, intrusion monitoring, and misinformation analysis. However, text-attributed graphs (TAGs), in which node information is expressed in natural language, remain underexplored, largely due to the absence of standardized benchmark datasets. In this work, we introduce TAG-AD, a comprehensive benchmark for anomaly node detection on TAGs. TAG-AD leverages large language models (LLMs) to generate realistic anomalous node texts directly in the raw text space, producing anomalies that are semantically coherent yet contextually inconsistent and thus more reflective of real-world irregularities. In addition, TAG-AD incorporates multiple other anomaly types, enabling thorough and reproducible evaluation of graph anomaly detection (GAD) methods. With these datasets, we further benchmark existing unsupervised GNN-based GAD methods as well as zero-shot LLMs for GAD. As part of our zero-shot detection setup, we propose a retrieval-augmented generation (RAG)-assisted, LLM-based zero-shot anomaly detection framework. The framework mitigates reliance on brittle, hand-crafted prompts by constructing a global anomaly knowledge base and distilling it into reusable analysis frameworks. Our experimental results reveal a clear division of strengths: LLMs are particularly effective at detecting contextual anomalies, whereas GNN-based methods remain superior for structural anomaly detection. Moreover, RAG-assisted prompting achieves performance comparable to human-designed prompts while eliminating manual prompt engineering, underscoring the practical value of our RAG-assisted zero-shot LLM anomaly detection framework.

Graph kernels have become an established and widely-used technique for solving classification tasks on graphs. This survey gives a comprehensive overview of techniques for kernel-based graph classification developed in the past 15 years. We describe and categorize graph kernels based on properties inherent to their design, such as the nature of their extracted graph features, their method of computation and their applicability to problems in practice. In an extensive experimental evaluation, we study the classification accuracy of a large suite of graph kernels on established benchmarks as well as new datasets. We compare the performance of popular kernels with several baseline methods and study the effect of applying a Gaussian RBF kernel to the metric induced by a graph kernel. In doing so, we find that simple baselines become competitive after this transformation on some datasets. Moreover, we study the extent to which existing graph kernels agree in their predictions (and prediction errors) and obtain a data-driven categorization of kernels as result. Finally, based on our experimental results, we derive a practitioner's guide to kernel-based graph classification.

This paper presents SYBILGAT, a novel approach to Sybil detection in social networks using Graph Attention Networks (GATs). Traditional methods for Sybil detection primarily leverage structural properties of networks; however, they tend to struggle with a large number of attack edges and are often unable to simultaneously utilize both known Sybil and honest nodes. Our proposed method addresses these limitations by dynamically assigning attention weights to different nodes during aggregations, enhancing detection performance. We conducted extensive experiments in various scenarios, including pretraining in sampled subgraphs, synthetic networks, and networks under targeted attacks. The results show that SYBILGAT significantly outperforms the state-of-the-art algorithms, particularly in scenarios with high attack complexity and when the number of attack edges increases. Our approach shows robust performance across different network models and sizes, even as the detection task becomes more challenging. We successfully applied the model to a real-world Twitter graph with more than 269k nodes and 6.8M edges. The flexibility and generalizability of SYBILGAT make it a promising tool to defend against Sybil attacks in online social networks with only structural information.

Detecting anomalies is important for identifying inefficiencies, errors, or fraud in business processes. Traditional process mining approaches focus on analyzing 'flattened', sequential, event logs based on a single case notion. However, many real-world process executions exhibit a graph-like structure, where events can be associated with multiple cases. Flattening event logs requires selecting a single case identifier which creates a gap with the real event data and artificially introduces anomalies in the event logs. Object-centric process mining avoids these limitations by allowing events to be related to different cases. This study proposes a novel framework for anomaly detection in business processes that exploits graph neural networks and the enhanced information offered by object-centric process mining. We first reconstruct and represent the process dependencies of the object-centric event logs as attributed graphs and then employ a graph convolutional autoencoder architecture to detect anomalous events. Our results show that our approach provides promising performance in detecting anomalies at the activity type and attributes level, although it struggles to detect anomalies in the temporal order of events.

Logs play a crucial role in system monitoring and debugging by recording valuable system information, including events and states. Although various methods have been proposed to detect anomalies in log sequences, they often overlook the significance of considering relations among system components, such as services and users, which can be identified from log contents. Understanding these relations is vital for detecting anomalies and their underlying causes. To address this issue, we introduce GLAD, a Graph-based Log Anomaly Detection framework designed to detect relational anomalies in system logs. GLAD incorporates log semantics, relational patterns, and sequential patterns into a unified framework for anomaly detection. Specifically, GLAD first introduces a field extraction module that utilizes prompt-based few-shot learning to identify essential fields from log contents. Then GLAD constructs dynamic log graphs for sliding windows by interconnecting extracted fields and log events parsed from the log parser. These graphs represent events and fields as nodes and their relations as edges. Subsequently, GLAD utilizes a temporal-attentive graph edge anomaly detection model for identifying anomalous relations in these dynamic log graphs. This model employs a Graph Neural Network (GNN)-based encoder enhanced with transformers to capture content, structural and temporal features. We evaluate our proposed method on three datasets, and the results demonstrate the effectiveness of GLAD in detecting anomalies indicated by varying relational patterns.

This paper analyses a set of simple adaptations that transform standard message-passing Graph Neural Networks (GNN) into provably powerful directed multigraph neural networks. The adaptations include multigraph port numbering, ego IDs, and reverse message passing. We prove that the combination of these theoretically enables the detection of any directed subgraph pattern. To validate the effectiveness of our proposed adaptations in practice, we conduct experiments on synthetic subgraph detection tasks, which demonstrate outstanding performance with almost perfect results. Moreover, we apply our proposed adaptations to two financial crime analysis tasks. We observe dramatic improvements in detecting money laundering transactions, improving the minority-class F1 score of a standard message-passing GNN by up to 30%, and closely matching or outperforming tree-based and GNN baselines. Similarly impressive results are observed on a real-world phishing detection dataset, boosting three standard GNNs' F1 scores by around 15% and outperforming all baselines.

Benefiting from the message passing mechanism, Graph Neural Networks (GNNs) have been successful on flourish tasks over graph data. However, recent studies have shown that attackers can catastrophically degrade the performance of GNNs by maliciously modifying the graph structure. A straightforward solution to remedy this issue is to model the edge weights by learning a metric function between pairwise representations of two end nodes, which attempts to assign low weights to adversarial edges. The existing methods use either raw features or representations learned by supervised GNNs to model the edge weights. However, both strategies are faced with some immediate problems: raw features cannot represent various properties of nodes (e.g., structure information), and representations learned by supervised GNN may suffer from the poor performance of the classifier on the poisoned graph. We need representations that carry both feature information and as mush correct structure information as possible and are insensitive to structural perturbations. To this end, we propose an unsupervised pipeline, named STABLE, to optimize the graph structure. Finally, we input the well-refined graph into a downstream classifier. For this part, we design an advanced GCN that significantly enhances the robustness of vanilla GCN without increasing the time complexity. Extensive experiments on four real-world graph benchmarks demonstrate that STABLE outperforms the state-of-the-art methods and successfully defends against various attacks.

We present ExCyTIn-Bench, the first benchmark to Evaluate an LLM agent x on the task of Cyber Threat Investigation through security questions derived from investigation graphs. Real-world security analysts must sift through a large number of heterogeneous alert signals and security logs, follow multi-hop chains of evidence, and compile an incident report. With the developments of LLMs, building LLM-based agents for automatic thread investigation is a promising direction. To assist the development and evaluation of LLM agents, we construct a dataset from a controlled Azure tenant that covers 8 simulated real-world multi-step attacks, 57 log tables from Microsoft Sentinel and related services, and 589 automatically generated questions. We leverage security logs extracted with expert-crafted detection logic to build threat investigation graphs, and then generate questions with LLMs using paired nodes on the graph, taking the start node as background context and the end node as answer. Anchoring each question to these explicit nodes and edges not only provides automatic, explainable ground truth answers but also makes the pipeline reusable and readily extensible to new logs. This also enables the automatic generation of procedural tasks with verifiable rewards, which can be naturally extended to training agents via reinforcement learning. Our comprehensive experiments with different models confirm the difficulty of the task: with the base setting, the average reward across all evaluated models is 0.249, and the best achieved is 0.368, leaving substantial headroom for future research. Code and data are coming soon!

With the increase of data in day-to-day life, businesses and different stakeholders need to analyze the data for better predictions. Traditionally, relational data has been a source of various insights, but with the increase in computational power and the need to understand deeper relationships between entities, the need to design new techniques has arisen. For this graph data analysis has become an extraordinary tool for understanding the data, which reveals more realistic and flexible modelling of complex relationships. Recently, Graph Neural Networks (GNNs) have shown great promise in various applications, such as social network analysis, recommendation systems, drug discovery, and more. However, many adversarial attacks can happen over the data, whether during training (poisoning attack) or during testing (evasion attack), which can adversely manipulate the desired outcome from the GNN model. Therefore, it is crucial to make the GNNs robust to such attacks. The existing robustness methods are computationally demanding and perform poorly when the intensity of attack increases. This paper presents a computationally efficient framework, namely, pLapGNN, based on weighted p-Laplacian for making GNNs robust. Empirical evaluation on real datasets establishes the efficacy and efficiency of the proposed method.

We present the first systematic approach to static and dynamic taint analysis for Graph APIs focusing on broken access control. The approach comprises the following. We taint nodes in the Graph API if they represent data requiring specific privileges in order to be retrieved or manipulated, and identify API calls which are related to sources and sinks. Then, we statically analyze whether tainted information flow between API source and sink calls occurs. To this end, we model the API calls using graph transformation rules. We subsequently use critical pair analysis to automatically analyze potential dependencies between rules representing source calls and rules representing sink calls. We distinguish direct from indirect tainted information flow and argue under which conditions the CPA is able to detect not only direct, but also indirect tainted flow. The static taint analysis (i) identifies flows that need to be further reviewed, since tainted nodes may be created by an API call and used or manipulated by another API call later without having the necessary privileges, and (ii) can be used to systematically design dynamic security tests for broken access control. The dynamic taint analysis checks if potential broken access control risks detected during the static taint analysis really occur. We apply the approach to a part of the GitHub GraphQL API. The application illustrates that our analysis supports the detection of two types of broken access control systematically: the case where users of the API may not be able to access or manipulate information, although they should be able to do so; and the case where users (or attackers) of the API may be able to access/manipulate information that they should not.

Anomaly detection aims to identify deviations from normal patterns within data. This task is particularly crucial in dynamic graphs, which are common in applications like social networks and cybersecurity, due to their evolving structures and complex relationships. Although recent deep learning-based methods have shown promising results in anomaly detection on dynamic graphs, they often lack of generalizability. In this study, we propose GeneralDyG, a method that samples temporal ego-graphs and sequentially extracts structural and temporal features to address the three key challenges in achieving generalizability: Data Diversity, Dynamic Feature Capture, and Computational Cost. Extensive experimental results demonstrate that our proposed GeneralDyG significantly outperforms state-of-the-art methods on four real-world datasets.

In this paper, we present "Graph Feature Preprocessor", a software library for detecting typical money laundering patterns in financial transaction graphs in real time. These patterns are used to produce a rich set of transaction features for downstream machine learning training and inference tasks such as detection of fraudulent financial transactions. We show that our enriched transaction features dramatically improve the prediction accuracy of gradient-boosting-based machine learning models. Our library exploits multicore parallelism, maintains a dynamic in-memory graph, and efficiently mines subgraph patterns in the incoming transaction stream, which enables it to be operated in a streaming manner. Our solution, which combines our Graph Feature Preprocessor and gradient-boosting-based machine learning models, can detect illicit transactions with higher minority-class F1 scores than standard graph neural networks in anti-money laundering and phishing datasets. In addition, the end-to-end throughput rate of our solution executed on a multicore CPU outperforms the graph neural network baselines executed on a powerful V100 GPU. Overall, the combination of high accuracy, a high throughput rate, and low latency of our solution demonstrates the practical value of our library in real-world applications.

Graph-based retrieval-augmented generation (Graph RAG) is increasingly deployed to support LLM applications by augmenting user queries with structured knowledge retrieved from a knowledge graph. While Graph RAG improves relational reasoning, it introduces a largely understudied threat: adversaries can reconstruct subgraphs from a target RAG system's knowledge graph, enabling privacy inference and replication of curated knowledge assets. We show that existing attacks are largely ineffective against Graph RAG even with simple prompt-based safeguards, because these attacks expose explicit exfiltration intent and are therefore easily suppressed by lightweight safe prompts. We identify three technical challenges for practical Graph RAG extraction under realistic safeguards and introduce GRASP, a closed-box, multi-turn subgraph reconstruction attack. GRASP (i) reframes extraction as a context-processing task, (ii) enforces format-compliant, instance-grounded outputs via per-record identifiers to reduce hallucinations and preserve relational details, and (iii) diversifies goal-driven attack queries using a momentum-aware scheduler to operate within strict query budgets. Across two real-world knowledge graphs, four safety-aligned LLMs, and multiple Graph RAG frameworks, GRASP attains the strongest type-faithful reconstruction where prior methods fail, reaching up to 82.9 F1. We further evaluate defenses and propose two lightweight mitigations that substantially reduce reconstruction fidelity without utility loss.

Intrusion Detection Systems (IDS) play a crucial role in ensuring the security of computer networks. Machine learning has emerged as a popular approach for intrusion detection due to its ability to analyze and detect patterns in large volumes of data. However, current ML-based IDS solutions often struggle to keep pace with the ever-changing nature of attack patterns and the emergence of new attack types. Additionally, these solutions face challenges related to class imbalance, where the number of instances belonging to different classes (normal and intrusions) is significantly imbalanced, which hinders their ability to effectively detect minor classes. In this paper, we propose a novel multi-agent reinforcement learning (RL) architecture, enabling automatic, efficient, and robust network intrusion detection. To enhance the capabilities of the proposed model, we have improved the DQN algorithm by implementing the weighted mean square loss function and employing cost-sensitive learning techniques. Our solution introduces a resilient architecture designed to accommodate the addition of new attacks and effectively adapt to changes in existing attack patterns. Experimental results realized using CIC-IDS-2017 dataset, demonstrate that our approach can effectively handle the class imbalance problem and provide a fine grained classification of attacks with a very low false positive rate. In comparison to the current state-of-the-art works, our solution demonstrates a significant superiority in both detection rate and false positive rate.

Deep neural networks (DNNs) have achieved significant performance in various tasks. However, recent studies have shown that DNNs can be easily fooled by small perturbation on the input, called adversarial attacks. As the extensions of DNNs to graphs, Graph Neural Networks (GNNs) have been demonstrated to inherit this vulnerability. Adversary can mislead GNNs to give wrong predictions by modifying the graph structure such as manipulating a few edges. This vulnerability has arisen tremendous concerns for adapting GNNs in safety-critical applications and has attracted increasing research attention in recent years. Thus, it is necessary and timely to provide a comprehensive overview of existing graph adversarial attacks and the countermeasures. In this survey, we categorize existing attacks and defenses, and review the corresponding state-of-the-art methods. Furthermore, we have developed a repository with representative algorithms (https://github.com/DSE-MSU/DeepRobust/tree/master/deeprobust/graph). The repository enables us to conduct empirical studies to deepen our understandings on attacks and defenses on graphs.

Graph-based Retrieval-Augmented Generation (GraphRAG) enhances the reasoning capabilities of Large Language Models (LLMs) by grounding their responses in structured knowledge graphs. Leveraging community detection and relation filtering techniques, GraphRAG systems demonstrate inherent resistance to traditional RAG attacks, such as text poisoning and prompt injection. However, in this paper, we find that the security of GraphRAG systems fundamentally relies on the topological integrity of the underlying graph, which can be undermined by implicitly corrupting the logical connections, without altering surface-level text semantics. To exploit this vulnerability, we propose LogicPoison, a novel attack framework that targets logical reasoning rather than injecting false contents. Specifically, LogicPoison employs a type-preserving entity swapping mechanism to perturb both global logic hubs for disrupting overall graph connectivity and query-specific reasoning bridges for severing essential multi-hop inference paths. This approach effectively reroutes valid reasoning into dead ends while maintaining surface-level textual plausibility. Comprehensive experiments across multiple benchmarks demonstrate that LogicPoison successfully bypasses GraphRAG's defenses, significantly degrading performance and outperforming state-of-the-art baselines in both effectiveness and stealth. Our code is available at bluehttps://github.com/Jord8061/logicPoison.

Graph generative models become increasingly effective for data distribution approximation and data augmentation. While they have aroused public concerns about their malicious misuses or misinformation broadcasts, just as what Deepfake visual and auditory media has been delivering to society. Hence it is essential to regulate the prevalence of generated graphs. To tackle this problem, we pioneer the formulation of the generated graph detection problem to distinguish generated graphs from real ones. We propose the first framework to systematically investigate a set of sophisticated models and their performance in four classification scenarios. Each scenario switches between seen and unseen datasets/generators during testing to get closer to real-world settings and progressively challenge the classifiers. Extensive experiments evidence that all the models are qualified for generated graph detection, with specific models having advantages in specific scenarios. Resulting from the validated generality and oblivion of the classifiers to unseen datasets/generators, we draw a safe conclusion that our solution can sustain for a decent while to curb generated graph misuses.

Credit card fraud incurs a considerable cost for both cardholders and issuing banks. Contemporary methods apply machine learning-based classifiers to detect fraudulent behavior from labeled transaction records. But labeled data are usually a small proportion of billions of real transactions due to expensive labeling costs, which implies that they do not well exploit many natural features from unlabeled data. Therefore, we propose a semi-supervised graph neural network for fraud detection. Specifically, we leverage transaction records to construct a temporal transaction graph, which is composed of temporal transactions (nodes) and interactions (edges) among them. Then we pass messages among the nodes through a Gated Temporal Attention Network (GTAN) to learn the transaction representation. We further model the fraud patterns through risk propagation among transactions. The extensive experiments are conducted on a real-world transaction dataset and two publicly available fraud detection datasets. The result shows that our proposed method, namely GTAN, outperforms other state-of-the-art baselines on three fraud detection datasets. Semi-supervised experiments demonstrate the excellent fraud detection performance of our model with only a tiny proportion of labeled data.

Automated detection of vulnerabilities in source code is an essential cybersecurity challenge, underpinning trust in digital systems and services. Graph Neural Networks (GNNs) have emerged as a promising approach as they can learn structural and logical code relationships in a data-driven manner. However, their performance is severely constrained by training data imbalances and label noise. GNNs often learn 'spurious' correlations from superficial code similarities, producing detectors that fail to generalize well to unseen real-world data. In this work, we propose a unified framework for robust and interpretable vulnerability detection, called VISION, to mitigate spurious correlations by systematically augmenting a counterfactual training dataset. Counterfactuals are samples with minimal semantic modifications but opposite labels. Our framework includes: (i) generating counterfactuals by prompting a Large Language Model (LLM); (ii) targeted GNN training on paired code examples with opposite labels; and (iii) graph-based interpretability to identify the crucial code statements relevant for vulnerability predictions while ignoring spurious ones. We find that VISION reduces spurious learning and enables more robust, generalizable detection, improving overall accuracy (from 51.8% to 97.8%), pairwise contrast accuracy (from 4.5% to 95.8%), and worst-group accuracy (from 0.7% to 85.5%) on the Common Weakness Enumeration (CWE)-20 vulnerability. We further demonstrate gains using proposed metrics: intra-class attribution variance, inter-class attribution distance, and node score dependency. We also release CWE-20-CFA, a benchmark of 27,556 functions (real and counterfactual) from the high-impact CWE-20 category. Finally, VISION advances transparent and trustworthy AI-based cybersecurity systems through interactive visualization for human-in-the-loop analysis.

Network robustness plays a crucial role in our understanding of complex interconnected systems such as transportation, communication, and computer networks. While significant research has been conducted in the area of network robustness, no comprehensive open-source toolbox currently exists to assist researchers and practitioners in this important topic. This lack of available tools hinders reproducibility and examination of existing work, development of new research, and dissemination of new ideas. We contribute TIGER, an open-sourced Python toolbox to address these challenges. TIGER contains 22 graph robustness measures with both original and fast approximate versions; 17 failure and attack strategies; 15 heuristic and optimization-based defense techniques; and 4 simulation tools. By democratizing the tools required to study network robustness, our goal is to assist researchers and practitioners in analyzing their own networks; and facilitate the development of new research in the field. TIGER has been integrated into the Nvidia Data Science Teaching Kit available to educators across the world; and Georgia Tech's Data and Visual Analytics class with over 1,000 students. TIGER is open sourced at: https://github.com/safreita1/TIGER

Subgraph representation learning is a technique for analyzing local structures (or shapes) within complex networks. Enabled by recent developments in scalable Graph Neural Networks (GNNs), this approach encodes relational information at a subgroup level (multiple connected nodes) rather than at a node level of abstraction. We posit that certain domain applications, such as anti-money laundering (AML), are inherently subgraph problems and mainstream graph techniques have been operating at a suboptimal level of abstraction. This is due in part to the scarcity of annotated datasets of real-world size and complexity, as well as the lack of software tools for managing subgraph GNN workflows at scale. To enable work in fundamental algorithms as well as domain applications in AML and beyond, we introduce Elliptic2, a large graph dataset containing 122K labeled subgraphs of Bitcoin clusters within a background graph consisting of 49M node clusters and 196M edge transactions. The dataset provides subgraphs known to be linked to illicit activity for learning the set of "shapes" that money laundering exhibits in cryptocurrency and accurately classifying new criminal activity. Along with the dataset we share our graph techniques, software tooling, promising early experimental results, and new domain insights already gleaned from this approach. Taken together, we find immediate practical value in this approach and the potential for a new standard in anti-money laundering and forensic analytics in cryptocurrencies and other financial networks.

Real-time detection and mitigation of technical anomalies are critical for large-scale cloud-native services, where even minutes of downtime can result in massive financial losses and diminished user trust. While customer incidents serve as a vital signal for discovering risks missed by monitoring, extracting actionable intelligence from this data remains challenging due to extreme noise, high throughput, and semantic complexity of diverse business lines. In this paper, we present TingIS, an end-to-end system designed for enterprise-grade incident discovery. At the core of TingIS is a multi-stage event linking engine that synergizes efficient indexing techniques with Large Language Models (LLMs) to make informed decisions on event merging, enabling the stable extraction of actionable incidents from just a handful of diverse user descriptions. This engine is complemented by a cascaded routing mechanism for precise business attribution and a multi-dimensional noise reduction pipeline that integrates domain knowledge, statistical patterns, and behavioral filtering. Deployed in a production environment handling a peak throughput of over 2,000 messages per minute and 300,000 messages per day, TingIS achieves a P90 alert latency of 3.5 minutes and a 95\% discovery rate for high-priority incidents. Benchmarks constructed from real-world data demonstrate that TingIS significantly outperforms baseline methods in routing accuracy, clustering quality, and Signal-to-Noise Ratio.

Graphs can be used to represent and reason about systems and a variety of metrics have been devised to quantify their global characteristics. However, little is currently known about how to construct a graph or improve an existing one given a target objective. In this work, we formulate the construction of a graph as a decision-making process in which a central agent creates topologies by trial and error and receives rewards proportional to the value of the target objective. By means of this conceptual framework, we propose an algorithm based on reinforcement learning and graph neural networks to learn graph construction and improvement strategies. Our core case study focuses on robustness to failures and attacks, a property relevant for the infrastructure and communication networks that power modern society. Experiments on synthetic and real-world graphs show that this approach can outperform existing methods while being cheaper to evaluate. It also allows generalization to out-of-sample graphs, as well as to larger out-of-distribution graphs in some cases. The approach is applicable to the optimization of other global structural properties of graphs.

The rich information underlying graphs has inspired further investigation of unsupervised graph representation. Existing studies mainly depend on node features and topological properties within static graphs to create self-supervised signals, neglecting the temporal components carried by real-world graph data, such as timestamps of edges. To overcome this limitation, this paper explores how to model temporal evolution on dynamic graphs elegantly. Specifically, we introduce a new inductive bias, namely temporal translation invariance, which illustrates the tendency of the identical node to keep similar labels across different timespans. Based on this assumption, we develop a dynamic graph representation framework CLDG that encourages the node to maintain locally consistent temporal translation invariance through contrastive learning on different timespans. Except for standard CLDG which only considers explicit topological links, our further proposed CLDG++ additionally employs graph diffusion to uncover global contextual correlations between nodes, and designs a multi-scale contrastive learning objective composed of local-local, local-global, and global-global contrasts to enhance representation capabilities. Interestingly, by measuring the consistency between different timespans to shape anomaly indicators, CLDG and CLDG++ are seamlessly integrated with the task of spotting anomalies on dynamic graphs, which has broad applications in many high-impact domains, such as finance, cybersecurity, and healthcare. Experiments demonstrate that CLDG and CLDG++ both exhibit desirable performance in downstream tasks including node classification and dynamic graph anomaly detection. Moreover, CLDG significantly reduces time and space complexity by implicitly exploiting temporal cues instead of complicated sequence models.

This paper investigates the temporal analysis of NetFlow datasets for machine learning (ML)-based network intrusion detection systems (NIDS). Although many previous studies have highlighted the critical role of temporal features, such as inter-packet arrival time and flow length/duration, in NIDS, the currently available NetFlow datasets for NIDS lack these temporal features. This study addresses this gap by creating and making publicly available a set of NetFlow datasets that incorporate these temporal features [1]. With these temporal features, we provide a comprehensive temporal analysis of NetFlow datasets by examining the distribution of various features over time and presenting time-series representations of NetFlow features. This temporal analysis has not been previously provided in the existing literature. We also borrowed an idea from signal processing, time frequency analysis, and tested it to see how different the time frequency signal presentations (TFSPs) are for various attacks. The results indicate that many attacks have unique patterns, which could help ML models to identify them more easily.

Many real-world data come in the form of graphs. Graph neural networks (GNNs), a new family of machine learning (ML) models, have been proposed to fully leverage graph data to build powerful applications. In particular, the inductive GNNs, which can generalize to unseen data, become mainstream in this direction. Machine learning models have shown great potential in various tasks and have been deployed in many real-world scenarios. To train a good model, a large amount of data as well as computational resources are needed, leading to valuable intellectual property. Previous research has shown that ML models are prone to model stealing attacks, which aim to steal the functionality of the target models. However, most of them focus on the models trained with images and texts. On the other hand, little attention has been paid to models trained with graph data, i.e., GNNs. In this paper, we fill the gap by proposing the first model stealing attacks against inductive GNNs. We systematically define the threat model and propose six attacks based on the adversary's background knowledge and the responses of the target models. Our evaluation on six benchmark datasets shows that the proposed model stealing attacks against GNNs achieve promising performance.

Vulnerability detection is crucial for ensuring the security and reliability of software systems. Recently, Graph Neural Networks (GNNs) have emerged as a prominent code embedding approach for vulnerability detection, owing to their ability to capture the underlying semantic structure of source code. However, GNNs face significant challenges in explainability due to their inherently black-box nature. To this end, several factual reasoning-based explainers have been proposed. These explainers provide explanations for the predictions made by GNNs by analyzing the key features that contribute to the outcomes. We argue that these factual reasoning-based explanations cannot answer critical what-if questions: What would happen to the GNN's decision if we were to alter the code graph into alternative structures? Inspired by advancements of counterfactual reasoning in artificial intelligence, we propose CFExplainer, a novel counterfactual explainer for GNN-based vulnerability detection. Unlike factual reasoning-based explainers, CFExplainer seeks the minimal perturbation to the input code graph that leads to a change in the prediction, thereby addressing the what-if questions for vulnerability detection. We term this perturbation a counterfactual explanation, which can pinpoint the root causes of the detected vulnerability and furnish valuable insights for developers to undertake appropriate actions for fixing the vulnerability. Extensive experiments on four GNN-based vulnerability detection models demonstrate the effectiveness of CFExplainer over existing state-of-the-art factual reasoning-based explainers.

In recent years, graph prompting has emerged as a promising research direction, enabling the learning of additional tokens or subgraphs appended to the original graphs without requiring retraining of pre-trained graph models across various applications. This novel paradigm, shifting from the traditional pretraining and finetuning to pretraining and prompting has shown significant empirical success in simulating graph data operations, with applications ranging from recommendation systems to biological networks and graph transferring. However, despite its potential, the theoretical underpinnings of graph prompting remain underexplored, raising critical questions about its fundamental effectiveness. The lack of rigorous theoretical proof of why and how much it works is more like a dark cloud over the graph prompt area to go further. To fill this gap, this paper introduces a theoretical framework that rigorously analyzes graph prompting from a data operation perspective. Our contributions are threefold: First, we provide a formal guarantee theorem, demonstrating graph prompts capacity to approximate graph transformation operators, effectively linking upstream and downstream tasks. Second, we derive upper bounds on the error of these data operations by graph prompts for a single graph and extend this discussion to batches of graphs, which are common in graph model training. Third, we analyze the distribution of data operation errors, extending our theoretical findings from linear graph models (e.g., GCN) to non-linear graph models (e.g., GAT). Extensive experiments support our theoretical results and confirm the practical implications of these guarantees.

Many cybersecurity problems that require real-time decision-making based on temporal observations can be abstracted as a sequence modeling problem, e.g., network intrusion detection from a sequence of arriving packets. Existing approaches like reinforcement learning may not be suitable for such cybersecurity decision problems, since the Markovian property may not necessarily hold and the underlying network states are often not observable. In this paper, we cast the problem of real-time network intrusion detection as casual sequence modeling and draw upon the power of the transformer architecture for real-time decision-making. By conditioning a causal decision transformer on past trajectories, consisting of the rewards, network packets, and detection decisions, our proposed framework will generate future detection decisions to achieve the desired return. It enables decision transformers to be applied to real-time network intrusion detection, as well as a novel tradeoff between the accuracy and timeliness of detection. The proposed solution is evaluated on public network intrusion detection datasets and outperforms several baseline algorithms using reinforcement learning and sequence modeling, in terms of detection accuracy and timeliness.

Intrusion Detection Systems (IDS) are critical components in safeguarding 5G/6G networks from both internal and external cyber threats. While traditional IDS approaches rely heavily on signature-based methods, they struggle to detect novel and evolving attacks. This paper presents an advanced IDS framework that leverages adversarial training and dynamic neural networks in 5G/6G networks to enhance network security by providing robust, real-time threat detection and response capabilities. Unlike conventional models, which require costly retraining to update knowledge, the proposed framework integrates incremental learning algorithms, reducing the need for frequent retraining. Adversarial training is used to fortify the IDS against poisoned data. By using fewer features and incorporating statistical properties, the system can efficiently detect potential threats. Extensive evaluations using the NSL- KDD dataset demonstrate that the proposed approach provides better accuracy of 82.33% for multiclass classification of various network attacks while resisting dataset poisoning. This research highlights the potential of adversarial-trained, dynamic neural networks for building resilient IDS solutions.

The current intrusion detection systems have a number of problems that limit their configurability, scalability and efficiency. There have been some propositions about distributed architectures based on multiple independent agents working collectively for intrusion detection. However, these distributed intrusion detection systems are not fully distributed as most of them centrally analyze data collected from distributed nodes which may lead to a single point of failure. In this paper, a distributed intrusion detection architecture is presented that is based on autonomous and cooperating agents without any centralized analysis components. The agents cooperate by using a hierarchical communication of interests and data, and the analysis of intrusion data is made by the agents at the lowest level of the hierarchy. This architecture provides significant advantages in scalability, flexibility, extensibility, fault tolerance, and resistance to compromise. A proof-of-concept prototype is developed and experiments have been conducted on it. The results show the effectiveness of the system in detecting intrusive activities.

Local graph clustering methods aim to detect small clusters in very large graphs without the need to process the whole graph. They are fundamental and scalable tools for a wide range of tasks such as local community detection, node ranking and node embedding. While prior work on local graph clustering mainly focuses on graphs without node attributes, modern real-world graph datasets typically come with node attributes that provide valuable additional information. We present a simple local graph clustering algorithm for graphs with node attributes, based on the idea of diffusing mass locally in the graph while accounting for both structural and attribute proximities. Using high-dimensional concentration results, we provide statistical guarantees on the performance of the algorithm for the recovery of a target cluster with a single seed node. We give conditions under which a target cluster generated from a fairly general contextual random graph model, which includes both the stochastic block model and the planted cluster model as special cases, can be fully recovered with bounded false positives. Empirically, we validate all theoretical claims using synthetic data, and we show that incorporating node attributes leads to superior local clustering performances using real-world graph datasets.

Research in Graph Signal Processing (GSP) aims to develop tools for processing data defined on irregular graph domains. In this paper we first provide an overview of core ideas in GSP and their connection to conventional digital signal processing. We then summarize recent developments in developing basic GSP tools, including methods for sampling, filtering or graph learning. Next, we review progress in several application areas using GSP, including processing and analysis of sensor network data, biological data, and applications to image processing and machine learning. We finish by providing a brief historical perspective to highlight how concepts recently developed in GSP build on top of prior research in other areas.

Machine learning-based intrusion detection systems (IDS) are critical for securing Industrial Internet of Things (IIoT) environments. Most adversarial research against them perturbs the feature vector or the traffic that produces it, and depends on gradient access, repeated model queries, or a learned model of benign traffic. A smaller line of work reshapes packet timing without querying the detector, but makes malicious traffic mimic a learned model of benign timing. Across these approaches, one assumption of industrial monitoring pipelines has received little attention: temporal synchronization. An IDS reconstructs operational state by aggregating telemetry into sliding or tumbling windows, so its view depends not only on what is observed but on when each observation falls relative to a window boundary. We introduce the Phantom State Attack (PSA), which exploits that dependence under a passive, zero-query threat model. Rather than modifying packets, perturbing features, querying the classifier, or fitting any model of benign traffic, PSA injects bounded timing drift calibrated to the attack flow's own inter-arrival variability, moving observations across the nearest window boundary by the minimal shift needed. The IDS then reconstructs a phantom state that diverges from the true process state. We evaluate PSA on ToN-IoT and CIC IIoT 2025 (DataSense), against Random Forest, MLP and XGBoost, measuring detection degradation, synchronization distortion, stealth, and attacker cost. PSA degrades detection on flows carrying enough packets for window-boundary redistribution, and leaves others almost unchanged, so its effect is conditional. A query-based baseline reaches higher raw success but needs many queries per window, while PSA needs none. The results identify temporal aggregation as an attack surface reachable under weaker assumptions than prior evasion techniques.

Distributed protocols should be robust to both benign malfunction (e.g. packet loss or delay) and attacks (e.g. message replay) from internal or external adversaries. In this paper we take a formal approach to the automated synthesis of attackers, i.e. adversarial processes that can cause the protocol to malfunction. Specifically, given a formal threat model capturing the distributed protocol model and network topology, as well as the placement, goals, and interface (inputs and outputs) of potential attackers, we automatically synthesize an attacker. We formalize four attacker synthesis problems - across attackers that always succeed versus those that sometimes fail, and attackers that attack forever versus those that do not - and we propose algorithmic solutions to two of them. We report on a prototype implementation called KORG and its application to TCP as a case-study. Our experiments show that KORG can automatically generate well-known attacks for TCP within seconds or minutes.

The natural combination of intricate topological structures and rich textual information in text-attributed graphs (TAGs) opens up a novel perspective for graph anomaly detection (GAD). However, existing GAD methods primarily focus on designing complex optimization objectives within the graph domain, overlooking the complementary value of the textual modality, whose features are often encoded by shallow embedding techniques, such as bag-of-words or skip-gram, so that semantic context related to anomalies may be missed. To unleash the enormous potential of textual modality, large language models (LLMs) have emerged as promising alternatives due to their strong semantic understanding and reasoning capabilities. Nevertheless, their application to TAG anomaly detection remains nascent, and they struggle to encode high-order structural information inherent in graphs due to input length constraints. For high-quality anomaly detection in TAGs, we propose CoLL, a novel framework that combines LLMs and graph neural networks (GNNs) to leverage their complementary strengths. CoLL employs multi-LLM collaboration for evidence-augmented generation to capture anomaly-relevant contexts while delivering human-readable rationales for detected anomalies. Moreover, CoLL integrates a GNN equipped with a gating mechanism to adaptively fuse textual features with evidence while preserving high-order topological information. Extensive experiments demonstrate the superiority of CoLL, achieving an average improvement of 13.37% in AP. This study opens a new avenue for incorporating LLMs in advancing GAD.

Intrusion Detection and Prevention Systems (IDS/IPS) in large enterprises can generate hundreds of thousands of alerts per hour, overwhelming analysts with logs requiring rapidly evolving expertise. Conventional machine-learning detectors reduce alert volume but still yield many false positives, while standard Retrieval-Augmented Generation (RAG) pipelines often retrieve irrelevant context and fail to justify predictions. We present CyberRAG, a modular agent-based RAG framework that delivers real-time classification, explanation, and structured reporting for cyber-attacks. A central LLM agent orchestrates: (i) fine-tuned classifiers specialized by attack family; (ii) tool adapters for enrichment and alerting; and (iii) an iterative retrieval-and-reason loop that queries a domain-specific knowledge base until evidence is relevant and self-consistent. Unlike traditional RAG, CyberRAG adopts an agentic design that enables dynamic control flow and adaptive reasoning. This architecture autonomously refines threat labels and natural-language justifications, reducing false positives and enhancing interpretability. It is also extensible: new attack types can be supported by adding classifiers without retraining the core agent. CyberRAG was evaluated on SQL Injection, XSS, and SSTI, achieving over 94\% accuracy per class and a final classification accuracy of 94.92\% through semantic orchestration. Generated explanations reached 0.94 in BERTScore and 4.9/5 in GPT-4-based expert evaluation, with robustness preserved against adversarial and unseen payloads. These results show that agentic, specialist-oriented RAG can combine high detection accuracy with trustworthy, SOC-ready prose, offering a flexible path toward partially automated cyber-defense workflows.

Advanced Persistent Threats (APT) attacks have plagued modern enterprises, causing significant financial losses. To counter these attacks, researchers propose techniques that capture the complex and stealthy scenarios of APT attacks by using provenance graphs to model system entities and their dependencies. Particularly, to accelerate attack detection and reduce financial losses, online provenance-based detection systems that detect and investigate APT attacks under the constraints of timeliness and limited resources are in dire need. Unfortunately, existing online systems usually sacrifice detection granularity to reduce computational complexity and produce provenance graphs with more than 100,000 nodes, posing challenges for security admins to interpret the detection results. In this paper, we design and implement NodLink, the first online detection system that maintains high detection accuracy without sacrificing detection granularity. Our insight is that the APT attack detection process in online provenance-based detection systems can be modeled as a Steiner Tree Problem (STP), which has efficient online approximation algorithms that recover concise attack-related provenance graphs with a theoretically bounded error. To utilize STP approximation algorithm frameworks for APT attack detection, we propose a novel design of in-memory cache, an efficient attack screening method, and a new STP approximation algorithm that is more efficient than the conventional one in APT attack detection while maintaining the same complexity. We evaluate NodLink in a production environment. The open-world experiment shows that NodLink outperforms two state-of-the-art (SOTA) online provenance analysis systems by achieving magnitudes higher detection and investigation accuracy while having the same or higher throughput.

Zero-shot graph anomaly detection seeks to deploy a detector trained on source graphs to unseen, unlabeled targets, yet domain shift can make source-derived notions of normality unreliable. We introduce RINSE (Robust Iterative Normality Self-Estimation), a gradient-free target-time framework that keeps the source-trained detector fixed while sequentially estimating target normality, representation calibration, and evidence reliability from the target graph. Its core idea is to identify a reliable subset of low-residual target nodes, use them to construct a trimmed target-aware normality model, and combine complementary anomaly evidence through reliability-gated rank fusion and encoder ensembling. Across eight unseen target graphs, RINSE achieves the highest average AUPRC among the evaluated methods under two separate preprocessing protocols, while block ablations and sensitivity analyses support the combined design. These results support robust target-time estimation as a practical approach to generalist graph anomaly detection without target labels, gradients, or per-target tuning.

Graphs or networks are a very convenient way to represent data with lots of interaction. Recently, Machine Learning on Graph data has gained a lot of traction. In particular, vertex classification and missing edge detection have very interesting applications, ranging from drug discovery to recommender systems. To achieve such tasks, tremendous work has been accomplished to learn embedding of nodes and edges into finite-dimension vector spaces. This task is called Graph Representation Learning. However, Graph Representation Learning techniques often display prohibitive time and memory complexities, preventing their use in real-time with business size graphs. In this paper, we address this issue by leveraging a degeneracy property of Graphs - the K-Core Decomposition. We present two techniques taking advantage of this decomposition to reduce the time and memory consumption of walk-based Graph Representation Learning algorithms. We evaluate the performances, expressed in terms of quality of embedding and computational resources, of the proposed techniques on several academic datasets. Our code is available at https://github.com/SBrandeis/kcore-embedding

Machine Learning has been steadily gaining traction for its use in Anomaly-based Network Intrusion Detection Systems (A-NIDS). Research into this domain is frequently performed using the KDD~CUP~99 dataset as a benchmark. Several studies question its usability while constructing a contemporary NIDS, due to the skewed response distribution, non-stationarity, and failure to incorporate modern attacks. In this paper, we compare the performance for KDD-99 alternatives when trained using classification models commonly found in literature: Neural Network, Support Vector Machine, Decision Tree, Random Forest, Naive Bayes and K-Means. Applying the SMOTE oversampling technique and random undersampling, we create a balanced version of NSL-KDD and prove that skewed target classes in KDD-99 and NSL-KDD hamper the efficacy of classifiers on minority classes (U2R and R2L), leading to possible security risks. We explore UNSW-NB15, a modern substitute to KDD-99 with greater uniformity of pattern distribution. We benchmark this dataset before and after SMOTE oversampling to observe the effect on minority performance. Our results indicate that classifiers trained on UNSW-NB15 match or better the Weighted F1-Score of those trained on NSL-KDD and KDD-99 in the binary case, thus advocating UNSW-NB15 as a modern substitute to these datasets.

Graph representations of programs are commonly a central element of machine learning for code research. We introduce an open source Python library python_graphs that applies static analysis to construct graph representations of Python programs suitable for training machine learning models. Our library admits the construction of control-flow graphs, data-flow graphs, and composite ``program graphs'' that combine control-flow, data-flow, syntactic, and lexical information about a program. We present the capabilities and limitations of the library, perform a case study applying the library to millions of competitive programming submissions, and showcase the library's utility for machine learning research.

Graph-structured data appears frequently in domains including chemistry, natural language semantics, social networks, and knowledge bases. In this work, we study feature learning techniques for graph-structured inputs. Our starting point is previous work on Graph Neural Networks (Scarselli et al., 2009), which we modify to use gated recurrent units and modern optimization techniques and then extend to output sequences. The result is a flexible and broadly useful class of neural network models that has favorable inductive biases relative to purely sequence-based models (e.g., LSTMs) when the problem is graph-structured. We demonstrate the capabilities on some simple AI (bAbI) and graph algorithm learning tasks. We then show it achieves state-of-the-art performance on a problem from program verification, in which subgraphs need to be matched to abstract data structures.

Reinforcement learning (RL) has been applied to attack graphs for penetration testing, however, trained agents do not reflect reality because the attack graphs lack operational nuances typically captured within the intelligence preparation of the battlefield (IPB) that include notions of (cyber) terrain. In particular, current practice constructs attack graphs exclusively using the Common Vulnerability Scoring System (CVSS) and its components. We present methods for constructing attack graphs using notions from IPB on cyber terrain analysis of obstacles, avenues of approach, key terrain, observation and fields of fire, and cover and concealment. We demonstrate our methods on an example where firewalls are treated as obstacles and represented in (1) the reward space and (2) the state dynamics. We show that terrain analysis can be used to bring realism to attack graphs for RL.

A subgraph is constructed by using a subset of vertices and edges of a given graph. There exist many graph properties that are hereditary for subgraphs. Hence, researchers from different communities have paid a great deal of attention in studying numerous subgraph problems, on top of the ordinary graph problems. Many algorithms are proposed in studying subgraph problems, where one common approach is by extracting the patterns and structures of a given graph. Due to the complex structures of certain types of graphs and to improve overall performances of the existing frameworks, machine learning techniques have recently been employed in dealing with various subgraph problems. In this article, we present a comprehensive review on five well known subgraph problems that have been tackled by using machine learning methods. They are subgraph isomorphism (both counting and matching), maximum common subgraph, community detection and community search problems. We provide an outline of each proposed method, and examine its designs and performances. We also explore non-learning-based algorithms for each problem and a brief discussion is given. We then suggest some promising research directions in this area, hoping that relevant subgraph problems can be tackled by using a similar strategy. Since there is a huge growth in employing machine learning techniques in recent years, we believe that this survey will serve as a good reference point to relevant research communities.

Anomaly-based Intrusion Detection System (IDS) has been a hot research topic because of its ability to detect new threats rather than only memorized signatures threats of signature-based IDS. Especially after the availability of advanced technologies that increase the number of hacking tools and increase the risk impact of an attack. The problem of any anomaly-based model is its high false-positive rate. The high false-positive rate is the reason why anomaly IDS is not commonly applied in practice. Because anomaly-based models classify an unseen pattern as a threat where it may be normal but not included in the training dataset. This type of problem is called overfitting where the model is not able to generalize. Optimizing Anomaly-based models by having a big training dataset that includes all possible normal cases may be an optimal solution but could not be applied in practice. Although we can increase the number of training samples to include much more normal cases, still we need a model that has more ability to generalize. In this research paper, we propose applying deep model instead of traditional models because it has more ability to generalize. Thus, we will obtain less false-positive by using big data and deep model. We made a comparison between machine learning and deep learning algorithms in the optimization of anomaly-based IDS by decreasing the false-positive rate. We did an experiment on the NSL-KDD benchmark and compared our results with one of the best used classifiers in traditional learning in IDS optimization. The experiment shows 10% lower false-positive by using deep learning instead of traditional learning.

Due to the increasing abuse of fraudulent activities that result in significant financial and reputational harm, Ethereum smart contracts face a significant problem in detecting fraud. Existing monitoring methods typically rely on lease code analysis or physically extracted features, which suffer from scalability and adaptability limitations. In this study, we use graph representation learning to observe purchase trends and find fraudulent deals. We can achieve powerful categorisation performance by using innovative machine learning versions and transforming Ethereum invoice data into graph structures. Our method addresses label imbalance through SMOTE-ENN techniques and evaluates models like Multi-Layer Perceptron ( MLP ) and Graph Convolutional Networks ( GCN). Experimental results show that the MLP type surpasses the GCN in this environment, with domain-specific assessments closely aligned with real-world assessments. This study provides a scalable and efficient way to improve Ethereum's ecosystem's confidence and security.

Real-world fraud detection applications benefit from graph learning techniques that jointly exploit node features, often rich in textual data, and graph structural information. Recently, Graph-Enhanced LLMs emerge as a promising graph learning approach that converts graph information into prompts, exploiting LLMs' ability to reason over both textual and structural information. Among them, text-only prompting, which converts graph information to prompts consisting solely of text tokens, offers a solution that relies only on LLM tuning without requiring additional graph-specific encoders. However, text-only prompting struggles on heterogeneous fraud-detection graphs: multi-hop relations expand exponentially with each additional hop, leading to rapidly growing neighborhoods associated with dense textual information. These neighborhoods may overwhelm the model with long, irrelevant content in the prompt and suppress key signals from the target node, thereby degrading performance. To address this challenge, we propose Dual Granularity Prompting (DGP), which mitigates information overload by preserving fine-grained textual details for the target node while summarizing neighbor information into coarse-grained text prompts. DGP introduces tailored summarization strategies for different data modalities, bi-level semantic abstraction for textual fields and statistical aggregation for numerical features, enabling effective compression of verbose neighbor content into concise, informative prompts. Experiments across public and industrial datasets demonstrate that DGP operates within a manageable token budget while improving fraud detection performance by up to 6.8% (AUPRC) over state-of-the-art methods, showing the potential of Graph-Enhanced LLMs for fraud detection.

The rapid growth of web-based services, particularly API-driven architectures, reflects an increasing reliance on distributed systems, exposing sensitive data to security risks and making the adoption of automated defensive mechanisms essential. In this context, where benign traffic predominates in real-world settings, modern defenses increasingly model normal behavior, relying on semi-supervised approaches trained on only normal data. However, ensuring the complete absence of anomalous instances in such training data is inherently difficult in practice, and mislabeled or contaminated attack samples can introduce backdoors into the learned defense, causing the model to silently misclassify certain attack patterns as normal behavior. This paper investigates the effectiveness of Transformer-based Language Models (TLMs) in the detection of anomalies in HTTP requests, focussing on providing detailed explanations for the detected anomalies. The study employs token-level logit-based surprisal mapping to provide both an anomaly score and a direct, detailed explanation via heatmap-like highlighting. The effectiveness of the proposed explainability approach is demonstrated by the discovery of labelling inconsistencies in a popular public dataset, revealing how anomalous contamination in the training data had induced backdoor-like failures in the detection models.

We study the black-box attacks on graph neural networks (GNNs) under a novel and realistic constraint: attackers have access to only a subset of nodes in the network, and they can only attack a small number of them. A node selection step is essential under this setup. We demonstrate that the structural inductive biases of GNN models can be an effective source for this type of attacks. Specifically, by exploiting the connection between the backward propagation of GNNs and random walks, we show that the common gradient-based white-box attacks can be generalized to the black-box setting via the connection between the gradient and an importance score similar to PageRank. In practice, we find attacks based on this importance score indeed increase the classification loss by a large margin, but they fail to significantly increase the mis-classification rate. Our theoretical and empirical analyses suggest that there is a discrepancy between the loss and mis-classification rate, as the latter presents a diminishing-return pattern when the number of attacked nodes increases. Therefore, we propose a greedy procedure to correct the importance score that takes into account of the diminishing-return pattern. Experimental results show that the proposed procedure can significantly increase the mis-classification rate of common GNNs on real-world data without access to model parameters nor predictions.

We present network embedding algorithms that capture information about a node from the local distribution over node attributes around it, as observed over random walks following an approach similar to Skip-gram. Observations from neighborhoods of different sizes are either pooled (AE) or encoded distinctly in a multi-scale approach (MUSAE). Capturing attribute-neighborhood relationships over multiple scales is useful for a diverse range of applications, including latent feature identification across disconnected networks with similar attributes. We prove theoretically that matrices of node-feature pointwise mutual information are implicitly factorized by the embeddings. Experiments show that our algorithms are robust, computationally efficient and outperform comparable models on social networks and web graphs.

Artificial General Intelligence (AGI) has revolutionized numerous fields, yet its integration with graph data, a cornerstone in our interconnected world, remains nascent. This paper presents a pioneering survey on the emerging domain of graph prompts in AGI, addressing key challenges and opportunities in harnessing graph data for AGI applications. Despite substantial advancements in AGI across natural language processing and computer vision, the application to graph data is relatively underexplored. This survey critically evaluates the current landscape of AGI in handling graph data, highlighting the distinct challenges in cross-modality, cross-domain, and cross-task applications specific to graphs. Our work is the first to propose a unified framework for understanding graph prompt learning, offering clarity on prompt tokens, token structures, and insertion patterns in the graph domain. We delve into the intrinsic properties of graph prompts, exploring their flexibility, expressiveness, and interplay with existing graph models. A comprehensive taxonomy categorizes over 100 works in this field, aligning them with pre-training tasks across node-level, edge-level, and graph-level objectives. Additionally, we present, ProG, a Python library, and an accompanying website, to support and advance research in graph prompting. The survey culminates in a discussion of current challenges and future directions, offering a roadmap for research in graph prompting within AGI. Through this comprehensive analysis, we aim to catalyze further exploration and practical applications of AGI in graph data, underlining its potential to reshape AGI fields and beyond. ProG and the website can be accessed by https://github.com/WxxShirley/Awesome-Graph-Prompt, and https://github.com/sheldonresearch/ProG, respectively.

Graph In-Context Learning, with the ability to adapt pre-trained graph models to novel and diverse downstream graphs without updating any parameters, has gained much attention in the community. The key to graph in-context learning is to perform downstream graphs conditioned on chosen prompt examples. Existing methods randomly select subgraphs or edges as prompts, leading to noisy graph prompts and inferior model performance. Additionally, due to the gap between pre-training and testing graphs, when the number of classes in the testing graphs is much greater than that in the training, the in-context learning ability will also significantly deteriorate. To tackle the aforementioned challenges, we develop a multi-stage adaptive prompt optimization method GraphPrompter, which optimizes the entire process of generating, selecting, and using graph prompts for better in-context learning capabilities. Firstly, Prompt Generator introduces a reconstruction layer to highlight the most informative edges and reduce irrelevant noise for graph prompt construction. Furthermore, in the selection stage, Prompt Selector employs the k-nearest neighbors algorithm and pre-trained selection layers to dynamically choose appropriate samples and minimize the influence of irrelevant prompts. Finally, we leverage a Prompt Augmenter with a cache replacement strategy to enhance the generalization capability of the pre-trained model on new datasets. Extensive experiments show that GraphPrompter effectively enhances the in-context learning ability of graph models. On average across all the settings, our approach surpasses the state-of-the-art baselines by over 8%. Our code is released at https://github.com/karin0018/GraphPrompter.

Network security has been an active research topic for long. One critical issue is improving the anomaly detection capability of intrusion detection systems (IDSs), such as firewalls. However, existing network anomaly datasets are out of date (i.e., being collected many years ago) or IP-anonymized, making the data characteristics differ from today's network. Therefore, this work introduces a new, large-scale, and real-world dataset, ZYELL-NCTU NetTraffic-1.0, which is collected from the raw output of firewalls in a real network, with the objective to advance the development of network security researches.

An important function of collaborative network intrusion detection is to analyze the network logs of the collaborators for joint IP addresses. However, sharing IP addresses in plain is sensitive and may be even subject to privacy legislation as it is personally identifiable information. In this paper, we present the privacy-preserving collection of IP addresses. We propose a single collector, over-threshold private set intersection protocol. In this protocol N participants identify the IP addresses that appear in at least t participant's sets without revealing any information about other IP addresses. Using a novel hashing scheme, we reduce the computational complexity of the previous state-of-the-art solution from O(M(N M/t)^{2t}) to O(t^2MN{t}), where M denotes the dataset size. This reduction makes it practically feasible to apply our protocol to real network logs. We test our protocol using joint networks logs of multiple institutions. Additionally, we present two deployment options: a collusion-safe deployment, which provides stronger security guarantees at the cost of increased communication overhead, and a non-interactive deployment, which assumes a non-colluding collector but offers significantly lower communication costs and applicable to many use cases of collaborative network intrusion detection similar to ours.

For a broad range of research, governmental and commercial applications it is important to understand the allegiances, communities and structure of key players in society. One promising direction towards extracting this information is to exploit the rich relational data in digital social networks (the social graph). As social media data sets are very large, most approaches make use of distributed computing systems for this purpose. Distributing graph processing requires solving many difficult engineering problems, which has lead some researchers to look at single-machine solutions that are faster and easier to maintain. In this article, we present a single-machine real-time system for large-scale graph processing that allows analysts to interactively explore graph structures. The key idea is that the aggregate actions of large numbers of users can be compressed into a data structure that encapsulates user similarities while being robust to noise and queryable in real-time. We achieve single machine real-time performance by compressing the neighbourhood of each vertex using minhash signatures and facilitate rapid queries through Locality Sensitive Hashing. These techniques reduce query times from hours using industrial desktop machines operating on the full graph to milliseconds on standard laptops. Our method allows exploration of strongly associated regions (i.e. communities) of large graphs in real-time on a laptop. It has been deployed in software that is actively used by social network analysts and offers another channel for media owners to monetise their data, helping them to continue to provide free services that are valued by billions of people globally.

Graph anomaly detection (GAD) has become an increasingly important task across various domains. With the rapid development of graph neural networks (GNNs), GAD methods have achieved significant performance improvements. However, fairness considerations in GAD remain largely underexplored. Indeed, GNN-based GAD models can inherit and amplify biases present in training data, potentially leading to unfair outcomes. While existing efforts have focused on developing fair GNNs, most approaches target node classification tasks, where models often rely on simple layer architectures rather than autoencoder-based structures, which are the most widely used architecturs for anomaly detection. To address fairness in autoencoder-based GAD models, we propose DisEntangled Counterfactual Adversarial Fair (DECAF)-GAD, a framework that alleviates bias while preserving GAD performance. Specifically, we introduce a structural causal model (SCM) to disentangle sensitive attributes from learned representations. Based on this causal framework, we formulate a specialized autoencoder architecture along with a fairness-guided loss function. Through extensive experiments on both synthetic and real-world datasets, we demonstrate that DECAF-GAD not only achieves competitive anomaly detection performance but also significantly enhances fairness metrics compared to baseline GAD methods. Our code is available at https://github.com/Tlhey/decaf_code.

Investigating cybersecurity incidents requires collecting and analyzing evidence from multiple log sources, including intrusion detection alerts, network traffic records, and authentication events. This process is labor-intensive: analysts must sift through large volumes of data to identify relevant indicators and piece together what happened. We present a RAG-based system that performs security incident analysis through targeted query-based filtering and LLM semantic reasoning. The system uses a query library with associated MITRE ATT&CK techniques to extract indicators from raw logs, then retrieves relevant context to answer forensic questions and reconstruct attack sequences. We evaluate the system with eight LLM configurations on malware traffic incidents and a multi-stage Active Directory attack. We find that LLMs have different performance and tradeoffs, with Claude Sonnet 4 achieving 94% and DeepSeek V3 achieving 89% average recall across 17 malware scenarios, while DeepSeek costs 15times less than Claude per analysis, and locally-deployed Llama 3.1:70b achieves 81% recall at zero per-query cost. Attack step detection on the Active Directory scenario reaches 100% precision and up to 96% recall with an enumeration prompt. These results demonstrate that combining targeted query-based filtering with RAG-based retrieval -- confirmed essential by ablation studies -- enables accurate, cost-effective security analysis within LLM context limits.

Although there exist several libraries for deep learning on graphs, they are aiming at implementing basic operations for graph deep learning. In the research community, implementing and benchmarking various advanced tasks are still painful and time-consuming with existing libraries. To facilitate graph deep learning research, we introduce DIG: Dive into Graphs, a turnkey library that provides a unified testbed for higher level, research-oriented graph deep learning tasks. Currently, we consider graph generation, self-supervised learning on graphs, explainability of graph neural networks, and deep learning on 3D graphs. For each direction, we provide unified implementations of data interfaces, common algorithms, and evaluation metrics. Altogether, DIG is an extensible, open-source, and turnkey library for researchers to develop new methods and effortlessly compare with common baselines using widely used datasets and evaluation metrics. Source code is available at https://github.com/divelab/DIG.

Log anomaly detection is a critical task for system operations and security assurance. However, in networked systems at scale, log data are generated at massive scale while instance-level annotations are prohibitively expensive, posing great difficulties to fine-grained anomaly localization. To address this challenge, we propose LogMILP (Log anomaly localization based on Multi-Instance Learning enhanced by prototypes and Perturbation), a weakly supervised framework that enables both bag-level anomaly detection and instance-level anomaly localization using only bag-level labels. Our method guides the model to pinpoint the critical log entries using prototype-guided structural modeling with counterfactual perturbation consistency regularization, thereby improving localization reliability and interpretability under coarse-grained supervision. Experimental results on three public datasets demonstrate that LogMILP achieves competitive detection performance while yielding significantly more reliable instance-level localization. Our code is open-sourced at https://github.com/YUK1207/LogMILP.

We present Deep Graph Infomax (DGI), a general approach for learning node representations within graph-structured data in an unsupervised manner. DGI relies on maximizing mutual information between patch representations and corresponding high-level summaries of graphs---both derived using established graph convolutional network architectures. The learnt patch representations summarize subgraphs centered around nodes of interest, and can thus be reused for downstream node-wise learning tasks. In contrast to most prior approaches to unsupervised learning with GCNs, DGI does not rely on random walk objectives, and is readily applicable to both transductive and inductive learning setups. We demonstrate competitive performance on a variety of node classification benchmarks, which at times even exceeds the performance of supervised learning.

Proximity preserving and structural role-based node embeddings have become a prime workhorse of applied graph mining. Novel node embedding techniques are often tested on a restricted set of benchmark datasets. In this paper, we propose a new diverse social network dataset called Twitch Gamers with multiple potential target attributes. Our analysis of the social network and node classification experiments illustrate that Twitch Gamers is suitable for assessing the predictive performance of novel proximity preserving and structural role-based node embedding algorithms.

Network embedding has been intensively studied in the literature and widely used in various applications, such as link prediction and node classification. While previous work focus on the design of new algorithms or are tailored for various problem settings, the discussion of initialization strategies in the learning process is often missed. In this work, we address this important issue of initialization for network embedding that could dramatically improve the performance of the algorithms on both effectiveness and efficiency. Specifically, we first exploit the graph partition technique that divides the graph into several disjoint subsets, and then construct an abstract graph based on the partitions. We obtain the initialization of the embedding for each node in the graph by computing the network embedding on the abstract graph, which is much smaller than the input graph, and then propagating the embedding among the nodes in the input graph. With extensive experiments on various datasets, we demonstrate that our initialization technique significantly improves the performance of the state-of-the-art algorithms on the evaluations of link prediction and node classification by up to 7.76% and 8.74% respectively. Besides, we show that the technique of initialization reduces the running time of the state-of-the-arts by at least 20%.

Multi-agent systems powered by Large Language Models excel at complex tasks through coordinated collaboration, yet they face high failure rates in multi-turn deep search scenarios. Existing temporal attribution methods struggle to accurately diagnose root causes, particularly when errors propagate across multiple agents. Attempts to automate failure attribution by analyzing action sequences remain ineffective due to their inability to account for information dependencies that span agents. This paper identifies two core challenges: (i) distinguishing symptoms from root causes in multi-agent error propagation, and (ii) tracing information dependencies beyond temporal order. To address these issues, we introduce GraphTracer, a framework that redefines failure attribution through information flow analysis. GraphTracer constructs Information Dependency Graphs (IDGs) to explicitly capture how agents reference and build on prior outputs. It localizes root causes by tracing through these dependency structures instead of relying on temporal sequences. GraphTracer also uses graph-aware synthetic data generation to target critical nodes, creating realistic failure scenarios. Evaluations on the Who\&When benchmark and integration into production systems demonstrate that GraphTracer-8B achieves up to 18.18\% higher attribution accuracy compared to state-of-the-art models and enables 4.8\% to 14.2\% performance improvements in deployed multi-agent frameworks, establishing a robust solution for multi-agent system debugging.

Graph Neural Networks (GNNs) have been widely applied to fraud detection problems in recent years, revealing the suspiciousness of nodes by aggregating their neighborhood information via different relations. However, few prior works have noticed the camouflage behavior of fraudsters, which could hamper the performance of GNN-based fraud detectors during the aggregation process. In this paper, we introduce two types of camouflages based on recent empirical studies, i.e., the feature camouflage and the relation camouflage. Existing GNNs have not addressed these two camouflages, which results in their poor performance in fraud detection problems. Alternatively, we propose a new model named CAmouflage-REsistant GNN (CARE-GNN), to enhance the GNN aggregation process with three unique modules against camouflages. Concretely, we first devise a label-aware similarity measure to find informative neighboring nodes. Then, we leverage reinforcement learning (RL) to find the optimal amounts of neighbors to be selected. Finally, the selected neighbors across different relations are aggregated together. Comprehensive experiments on two real-world fraud datasets demonstrate the effectiveness of the RL algorithm. The proposed CARE-GNN also outperforms state-of-the-art GNNs and GNN-based fraud detectors. We integrate all GNN-based fraud detectors as an opensource toolbox: https://github.com/safe-graph/DGFraud. The CARE-GNN code and datasets are available at https://github.com/YingtongDou/CARE-GNN.

We develop tools for explicitly constructing categories enriched over generating data and that compose via ordinary scalar and matrix arithmetic arithmetic operations. We characterize meaningful size maps, weightings, and magnitude that reveal features analogous to outliers that these same notions have previously been shown to reveal in the context of metric spaces. Throughout, we provide examples of such "outlier detection" relevant to the analysis of computer programs, neural networks, cyber-physical systems, and networks of communications channels.

With the growing use of information technology in all life domains, hacking has become more negatively effective than ever before. Also with developing technologies, attacks numbers are growing exponentially every few months and become more sophisticated so that traditional IDS becomes inefficient detecting them. This paper proposes a solution to detect not only new threats with higher detection rate and lower false positive than already used IDS, but also it could detect collective and contextual security attacks. We achieve those results by using Networking Chatbot, a deep recurrent neural network: Long Short Term Memory (LSTM) on top of Apache Spark Framework that has an input of flow traffic and traffic aggregation and the output is a language of two words, normal or abnormal. We propose merging the concepts of language processing, contextual analysis, distributed deep learning, big data, anomaly detection of flow analysis. We propose a model that describes the network abstract normal behavior from a sequence of millions of packets within their context and analyzes them in near real-time to detect point, collective and contextual anomalies. Experiments are done on MAWI dataset, and it shows better detection rate not only than signature IDS, but also better than traditional anomaly IDS. The experiment shows lower false positive, higher detection rate and better point anomalies detection. As for prove of contextual and collective anomalies detection, we discuss our claim and the reason behind our hypothesis. But the experiment is done on random small subsets of the dataset because of hardware limitations, so we share experiment and our future vision thoughts as we wish that full prove will be done in future by other interested researchers who have better hardware infrastructure than ours.

The problem of predicting node properties (e.g., node classes) in graphs has received significant attention due to its broad range of applications. Graphs from real-world datasets often evolve over time, with newly emerging edges and dynamically changing node properties, posing a significant challenge for this problem. In response, temporal graph neural networks (TGNNs) have been developed to predict dynamic node properties from a stream of emerging edges. However, our analysis reveals that most TGNN-based methods are (a) far less effective without proper node features and, due to their complex model architectures, (b) vulnerable to distribution shifts. In this paper, we propose SPLASH, a simple yet powerful method for predicting node properties on edge streams under distribution shifts. Our key contributions are as follows: (1) we propose feature augmentation methods and an automatic feature selection method for edge streams, which improve the effectiveness of TGNNs, (2) we propose a lightweight MLP-based TGNN architecture that is highly efficient and robust under distribution shifts, and (3) we conduct extensive experiments to evaluate the accuracy, efficiency, generalization, and qualitative performance of the proposed method and its competitors on dynamic node classification, dynamic anomaly detection, and node affinity prediction tasks across seven real-world datasets.

Graph Structure Learning (GSL) has recently garnered considerable attention due to its ability to optimize both the parameters of Graph Neural Networks (GNNs) and the computation graph structure simultaneously. Despite the proliferation of GSL methods developed in recent years, there is no standard experimental setting or fair comparison for performance evaluation, which creates a great obstacle to understanding the progress in this field. To fill this gap, we systematically analyze the performance of GSL in different scenarios and develop a comprehensive Graph Structure Learning Benchmark (GSLB) curated from 20 diverse graph datasets and 16 distinct GSL algorithms. Specifically, GSLB systematically investigates the characteristics of GSL in terms of three dimensions: effectiveness, robustness, and complexity. We comprehensively evaluate state-of-the-art GSL algorithms in node- and graph-level tasks, and analyze their performance in robust learning and model complexity. Further, to facilitate reproducible research, we have developed an easy-to-use library for training, evaluating, and visualizing different GSL methods. Empirical results of our extensive experiments demonstrate the ability of GSL and reveal its potential benefits on various downstream tasks, offering insights and opportunities for future research. The code of GSLB is available at: https://github.com/GSL-Benchmark/GSLB.

Many machine learning methods have been proposed to achieve accurate transaction fraud detection, which is essential to the financial security of individuals and banks. However, most existing methods leverage original features only or require manual feature engineering. They lack the ability to learn discriminative representations from transaction data. Moreover, criminals often commit fraud by imitating cardholders' behaviors, which causes the poor performance of existing detection models. In this paper, we propose an Adaptive Sampling and Aggregation-based Graph Neural Network (ASA-GNN) that learns discriminative representations to improve the performance of transaction fraud detection. A neighbor sampling strategy is performed to filter noisy nodes and supplement information for fraudulent nodes. Specifically, we leverage cosine similarity and edge weights to adaptively select neighbors with similar behavior patterns for target nodes and then find multi-hop neighbors for fraudulent nodes. A neighbor diversity metric is designed by calculating the entropy among neighbors to tackle the camouflage issue of fraudsters and explicitly alleviate the over-smoothing phenomena. Extensive experiments on three real financial datasets demonstrate that the proposed method ASA-GNN outperforms state-of-the-art ones.

This paper studies the problem of embedding very large information networks into low-dimensional vector spaces, which is useful in many tasks such as visualization, node classification, and link prediction. Most existing graph embedding methods do not scale for real world information networks which usually contain millions of nodes. In this paper, we propose a novel network embedding method called the "LINE," which is suitable for arbitrary types of information networks: undirected, directed, and/or weighted. The method optimizes a carefully designed objective function that preserves both the local and global network structures. An edge-sampling algorithm is proposed that addresses the limitation of the classical stochastic gradient descent and improves both the effectiveness and the efficiency of the inference. Empirical experiments prove the effectiveness of the LINE on a variety of real-world information networks, including language networks, social networks, and citation networks. The algorithm is very efficient, which is able to learn the embedding of a network with millions of vertices and billions of edges in a few hours on a typical single machine. The source code of the LINE is available online.

With the proliferation of the Internet of Things (IoT) and the rising interconnectedness of devices, network security faces significant challenges, especially from anomalous activities. While traditional machine learning-based intrusion detection systems (ML-IDS) effectively employ supervised learning methods, they possess limitations such as the requirement for labeled data and challenges with high dimensionality. Recent unsupervised ML-IDS approaches such as AutoEncoders and Generative Adversarial Networks (GAN) offer alternative solutions but pose challenges in deployment onto resource-constrained IoT devices and in interpretability. To address these concerns, this paper proposes a novel federated unsupervised anomaly detection framework, FedPCA, that leverages Principal Component Analysis (PCA) and the Alternating Directions Method Multipliers (ADMM) to learn common representations of distributed non-i.i.d. datasets. Building on the FedPCA framework, we propose two algorithms, FEDPE in Euclidean space and FEDPG on Grassmann manifolds. Our approach enables real-time threat detection and mitigation at the device level, enhancing network resilience while ensuring privacy. Moreover, the proposed algorithms are accompanied by theoretical convergence rates even under a subsampling scheme, a novel result. Experimental results on the UNSW-NB15 and TON-IoT datasets show that our proposed methods offer performance in anomaly detection comparable to nonlinear baselines, while providing significant improvements in communication and memory efficiency, underscoring their potential for securing IoT networks.

Evaluating and enhancing the general capabilities of large language models (LLMs) has been an important research topic. Graph is a common data structure in the real world, and understanding graph data is a crucial part for advancing general intelligence. To evaluate and enhance the graph understanding abilities of LLMs, in this paper, we propose a benchmark named GraphInstruct, which comprehensively includes 21 classical graph reasoning tasks, providing diverse graph generation pipelines and detailed reasoning steps. Based on GraphInstruct, we further construct GraphLM through efficient instruction-tuning, which shows prominent graph understanding capability. In order to enhance the LLM with graph reasoning capability as well, we propose a step mask training strategy, and construct a model named GraphLM+. As one of the pioneering efforts to enhance the graph understanding and reasoning abilities of LLMs, extensive experiments have demonstrated the superiority of GraphLM and GraphLM+ over other LLMs. We look forward to more researchers exploring the potential of LLMs in the graph data mining domain through GraphInstruct. Our code for generating GraphInstruct is released publicly at: https://github.com/CGCL-codes/GraphInstruct.

Random walks are widely used for mining networks due to the computational efficiency of computing them. For instance, graph representation learning learns a d-dimensional embedding space, so that the nodes that tend to co-occur on random walks (a proxy of being in the same network neighborhood) are close in the embedding space. Specific local network topology (i.e., structure) influences the co-occurrence of nodes on random walks, so random walks of limited length capture only partial topological information, hence diminishing the performance of downstream methods. We explicitly capture all topological neighborhood information and improve performance by introducing orbit adjacencies that quantify the adjacencies of two nodes as co-occurring on a given pair of graphlet orbits, which are symmetric positions on graphlets (small, connected, non-isomorphic, induced subgraphs of a large network). Importantly, we mathematically prove that random walks on up to k nodes capture only a subset of all the possible orbit adjacencies for up to k-node graphlets. Furthermore, we enable orbit adjacency-based analysis of networks by developing an efficient GRaphlet-orbit ADjacency COunter (GRADCO), which exhaustively computes all 28 orbit adjacency matrices for up to four-node graphlets. Note that four-node graphlets suffice, because real networks are usually small-world. In large networks on around 20,000 nodes, GRADCOcomputesthe28matricesinminutes. Onsixrealnetworksfromvarious domains, we compare the performance of node-label predictors obtained by using the network embeddings based on our orbit adjacencies to those based on random walks. We find that orbit adjacencies, which include those unseen by random walks, outperform random walk-based adjacencies, demonstrating the importance of the inclusion of the topological neighborhood information that is unseen by random walks.

We investigate novel random graph embeddings that can be computed in expected polynomial time and that are able to distinguish all non-isomorphic graphs in expectation. Previous graph embeddings have limited expressiveness and either cannot distinguish all graphs or cannot be computed efficiently for every graph. To be able to approximate arbitrary functions on graphs, we are interested in efficient alternatives that become arbitrarily expressive with increasing resources. Our approach is based on Lov\'asz' characterisation of graph isomorphism through an infinite dimensional vector of homomorphism counts. Our empirical evaluation shows competitive results on several benchmark graph learning tasks.